Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS11755

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
2,682,692	-		HSERO_RS11750	0.31	+1.0
2,682,727	-		HSERO_RS11750	0.33	+0.0
2,682,887	+		HSERO_RS11750	0.45	+0.1
2,683,218	-		HSERO_RS11750	0.70	-0.5
2,683,277	-		HSERO_RS11750	0.75	-0.3
2,683,412	-		HSERO_RS11750	0.85	-0.6
2,683,551	+				+0.3
2,683,605	-				-0.5
2,683,747	+		HSERO_RS11755	0.16	-0.3
2,683,752	-		HSERO_RS11755	0.17	-1.2
2,683,782	-		HSERO_RS11755	0.21	-1.3
2,683,811	-		HSERO_RS11755	0.25	-0.4
2,683,811	-		HSERO_RS11755	0.25	-1.3
2,684,058	-		HSERO_RS11755	0.61	+0.2
2,684,257	-		HSERO_RS11755	0.89	-0.6
2,684,343	+				+0.5
2,684,467	+				-0.1
2,684,518	+				-0.3
2,684,697	-				+0.1
2,684,733	-				+1.4
2,684,871	-		HSERO_RS11760	0.17	-0.4
2,684,912	-		HSERO_RS11760	0.23	+0.1
2,684,960	+		HSERO_RS11760	0.29	+0.0
2,685,017	+		HSERO_RS11760	0.37	-0.2
2,685,315	-		HSERO_RS11760	0.78	+0.2
2,685,315	-		HSERO_RS11760	0.78	-0.4