Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS10850

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
2,445,198	-				-1.0
2,445,275	+				-1.6
2,445,324	+				-1.2
2,445,332	-				+1.5
2,445,394	+				-0.9
2,445,531	+				-1.7
2,445,535	-				+1.4
2,445,535	-				-0.2
2,445,552	+				-0.5
2,445,560	-				-0.8
2,445,687	-				+0.1
2,445,687	-				-0.5
2,445,735	+				+0.7
2,445,787	-				+0.3
2,445,930	+				-0.3
2,445,933	-				-0.2
2,446,739	-		HSERO_RS10850	0.30	+0.0
2,446,759	+		HSERO_RS10850	0.31	+0.5
2,446,771	+		HSERO_RS10850	0.32	+0.1
2,446,772	-		HSERO_RS10850	0.32	-1.5
2,446,852	-		HSERO_RS10850	0.35	+0.5
2,447,140	-		HSERO_RS10850	0.48	+1.1
2,448,156	+				-0.1
2,448,935	+				+0.6
2,449,113	-		HSERO_RS10860	0.30	+0.1