Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS09855

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
2,229,345	+				+3.1
2,229,382	+		HSERO_RS09845	0.62	-0.0
2,229,481	-		HSERO_RS09845	0.73	+0.4
2,229,481	-		HSERO_RS09845	0.73	-0.6
2,229,538	+		HSERO_RS09845	0.80	+0.4
2,229,776	+				-1.3
2,229,784	-				-3.0
2,229,929	-		HSERO_RS09850	0.34	+0.6
2,229,936	+		HSERO_RS09850	0.36	+1.5
2,230,149	+				-0.6
2,230,933	-		HSERO_RS09855	0.34	+2.1
2,231,055	+		HSERO_RS09855	0.39	-0.4
2,231,055	+		HSERO_RS09855	0.39	+0.1
2,231,407	+		HSERO_RS09855	0.55	+1.1
2,232,383	+				-0.9
2,232,915	+				+0.7
2,232,934	-				+0.6
2,232,992	-				-1.0
2,232,992	-				+0.5
2,233,302	-		HSERO_RS09870	0.51	-1.1
2,233,304	+		HSERO_RS09870	0.51	-1.0
2,233,352	+		HSERO_RS09870	0.63	+0.6
2,233,395	+		HSERO_RS09870	0.74	-0.4
2,233,395	+		HSERO_RS09870	0.74	-0.1