Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS09745

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
2,208,585	+		HSERO_RS09740	0.28	-0.1
2,208,753	+		HSERO_RS09740	0.42	-0.4
2,208,767	+		HSERO_RS09740	0.43	-2.5
2,208,996	-		HSERO_RS09740	0.62	-0.5
2,209,118	-		HSERO_RS09740	0.73	-1.9
2,209,187	+		HSERO_RS09740	0.78	+0.1
2,209,187	+		HSERO_RS09740	0.78	-1.0
2,209,400	+				-1.9
2,209,438	+				-2.6
2,209,472	+				-0.3
2,209,638	+		HSERO_RS09745	0.26	-2.2
2,210,025	+		HSERO_RS09745	0.81	+0.5
2,210,213	-				+0.7
2,210,494	-		HSERO_RS09750	0.13	-0.3
2,210,689	+		HSERO_RS09750	0.29	+0.5
2,210,975	+		HSERO_RS09750	0.51	+0.1
2,211,050	-		HSERO_RS09750	0.57	+1.0
2,211,078	+		HSERO_RS09750	0.59	+0.3