Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS08115

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
1,854,460	-		HSERO_RS08110	0.13	-0.1
1,854,541	-		HSERO_RS08110	0.21	-0.8
1,854,543	+		HSERO_RS08110	0.21	-0.5
1,854,551	-		HSERO_RS08110	0.22	-2.1
1,854,604	-		HSERO_RS08110	0.28	+1.0
1,854,919	+		HSERO_RS08110	0.60	-0.4
1,854,967	+		HSERO_RS08110	0.65	-0.4
1,855,655	-		HSERO_RS08115	0.88	-2.1
1,856,038	+				+1.2
1,856,100	+				-0.6
1,856,105	+				+1.5
1,856,108	-				+0.4
1,856,110	+				+1.4
1,856,113	-				-0.3
1,856,195	-				-0.2
1,856,321	+				+0.2
1,856,654	-		HSERO_RS08125	0.29	+0.1