Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS07600

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
1,732,037	-				-0.5
1,732,248	-		HSERO_RS07595	0.34	-0.3
1,732,621	+		HSERO_RS07595	0.89	-0.9
1,732,840	-				+0.1
1,732,847	-				-0.9
1,732,860	-				-2.2
1,733,209	-		HSERO_RS07600	0.36	-0.9
1,733,246	+		HSERO_RS07600	0.39	-0.7
1,733,465	-		HSERO_RS07600	0.62	-1.3
1,733,829	-				-1.5
1,733,834	-				-0.8
1,734,508	+				+1.0
1,734,529	-				+0.0
1,734,648	+				-0.5
1,734,757	+				-0.7
1,734,757	+				+0.3
1,734,757	+				-0.3