Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS07025

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
1,599,166	-		HSERO_RS07015	0.76	+0.2
1,599,166	-		HSERO_RS07015	0.76	-0.7
1,599,180	-		HSERO_RS07015	0.78	-0.8
1,599,220	-		HSERO_RS07015	0.81	-0.3
1,599,245	-		HSERO_RS07015	0.83	-0.0
1,599,341	-				-0.0
1,599,404	-				+2.7
1,599,512	-				-0.6
1,599,758	-		HSERO_RS07020	0.73	+0.2
1,599,884	+				+0.3
1,599,888	-				+0.4
1,600,050	-				-0.5
1,600,102	-				-2.5
1,600,119	+				-1.1
1,600,127	-				-1.4
1,600,129	+				-1.1
1,600,137	-				-0.5
1,600,137	-				+0.1
1,600,192	+		HSERO_RS07025	0.13	-1.0
1,600,407	+		HSERO_RS07025	0.81	-0.9