Strain Fitness in Marinobacter adhaerens HP15 around HP15_p187g162

Experiment: Control growth in Pro99_seawater

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_p187g161 and HP15_p187g162 are separated by 1 nucleotidesHP15_p187g162 and HP15_p187g163 are separated by 326 nucleotides HP15_p187g161: HP15_p187g161 - conserved hypothetical protein, at 163,965 to 164,936 _p187g161 HP15_p187g162: HP15_p187g162 - hypothetical protein, at 164,938 to 165,183 _p187g162 HP15_p187g163: HP15_p187g163 - phage integrase family protein, at 165,510 to 166,814 _p187g163 Position (kb) 164 165 166Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 163.940 kb on + strandat 163.948 kb on - strandat 163.948 kb on - strandat 163.964 kb on + strandat 163.969 kb on + strandat 163.972 kb on - strandat 163.986 kb on - strandat 164.002 kb on + strandat 164.161 kb on + strand, within HP15_p187g161at 164.169 kb on - strand, within HP15_p187g161at 164.169 kb on - strand, within HP15_p187g161at 164.220 kb on + strand, within HP15_p187g161at 164.250 kb on - strand, within HP15_p187g161at 164.338 kb on - strand, within HP15_p187g161at 164.344 kb on - strand, within HP15_p187g161at 164.344 kb on - strand, within HP15_p187g161at 164.344 kb on - strand, within HP15_p187g161at 164.344 kb on - strand, within HP15_p187g161at 164.344 kb on - strand, within HP15_p187g161at 164.366 kb on - strand, within HP15_p187g161at 164.370 kb on - strand, within HP15_p187g161at 164.372 kb on + strand, within HP15_p187g161at 164.507 kb on + strand, within HP15_p187g161at 164.508 kb on + strand, within HP15_p187g161at 164.518 kb on + strand, within HP15_p187g161at 164.518 kb on - strand, within HP15_p187g161at 164.526 kb on - strand, within HP15_p187g161at 164.541 kb on - strand, within HP15_p187g161at 164.541 kb on - strand, within HP15_p187g161at 164.541 kb on - strand, within HP15_p187g161at 164.543 kb on - strand, within HP15_p187g161at 164.558 kb on - strand, within HP15_p187g161at 164.560 kb on + strand, within HP15_p187g161at 164.581 kb on + strand, within HP15_p187g161at 164.639 kb on + strand, within HP15_p187g161at 164.639 kb on + strand, within HP15_p187g161at 164.642 kb on - strand, within HP15_p187g161at 164.647 kb on - strand, within HP15_p187g161at 164.647 kb on - strand, within HP15_p187g161at 164.677 kb on + strand, within HP15_p187g161at 164.677 kb on + strand, within HP15_p187g161at 164.677 kb on + strand, within HP15_p187g161at 164.677 kb on + strand, within HP15_p187g161at 164.685 kb on - strand, within HP15_p187g161at 164.685 kb on - strand, within HP15_p187g161at 164.685 kb on - strand, within HP15_p187g161at 164.685 kb on - strand, within HP15_p187g161at 164.685 kb on - strand, within HP15_p187g161at 164.685 kb on - strand, within HP15_p187g161at 164.685 kb on - strand, within HP15_p187g161at 164.695 kb on + strand, within HP15_p187g161at 164.745 kb on - strand, within HP15_p187g161at 164.765 kb on + strand, within HP15_p187g161at 164.847 kb on + strandat 164.847 kb on + strandat 164.859 kb on - strandat 164.859 kb on - strandat 164.860 kb on + strandat 164.867 kb on - strandat 164.917 kb on + strandat 164.988 kb on + strand, within HP15_p187g162at 164.988 kb on + strand, within HP15_p187g162at 164.996 kb on - strand, within HP15_p187g162at 165.048 kb on + strand, within HP15_p187g162at 165.050 kb on + strand, within HP15_p187g162at 165.058 kb on - strand, within HP15_p187g162at 165.077 kb on + strand, within HP15_p187g162at 165.085 kb on - strand, within HP15_p187g162at 165.120 kb on + strand, within HP15_p187g162at 165.453 kb on - strandat 165.490 kb on - strandat 165.500 kb on - strandat 165.557 kb on - strandat 165.567 kb on - strandat 165.606 kb on + strandat 165.614 kb on - strandat 165.650 kb on - strand, within HP15_p187g163at 165.650 kb on - strand, within HP15_p187g163at 165.651 kb on - strand, within HP15_p187g163at 165.688 kb on + strand, within HP15_p187g163at 165.813 kb on + strand, within HP15_p187g163at 165.838 kb on - strand, within HP15_p187g163at 165.904 kb on - strand, within HP15_p187g163at 165.924 kb on + strand, within HP15_p187g163at 165.932 kb on - strand, within HP15_p187g163at 166.022 kb on + strand, within HP15_p187g163at 166.027 kb on + strand, within HP15_p187g163at 166.040 kb on + strand, within HP15_p187g163

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Per-strain Table

Position Strand Gene LocusTag Fraction Control growth in Pro99_seawater
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163,940 + +2.4
163,948 - +1.1
163,948 - +0.6
163,964 + +0.6
163,969 + +0.8
163,972 - -1.7
163,986 - -2.6
164,002 + +0.1
164,161 + HP15_p187g161 0.20 -0.3
164,169 - HP15_p187g161 0.21 +0.0
164,169 - HP15_p187g161 0.21 +0.9
164,220 + HP15_p187g161 0.26 -0.2
164,250 - HP15_p187g161 0.29 -2.5
164,338 - HP15_p187g161 0.38 +0.6
164,344 - HP15_p187g161 0.39 -0.0
164,344 - HP15_p187g161 0.39 -0.4
164,344 - HP15_p187g161 0.39 -3.2
164,344 - HP15_p187g161 0.39 +0.1
164,344 - HP15_p187g161 0.39 +0.2
164,366 - HP15_p187g161 0.41 -0.7
164,370 - HP15_p187g161 0.42 +0.6
164,372 + HP15_p187g161 0.42 +0.7
164,507 + HP15_p187g161 0.56 +1.0
164,508 + HP15_p187g161 0.56 +0.2
164,518 + HP15_p187g161 0.57 +1.0
164,518 - HP15_p187g161 0.57 -2.0
164,526 - HP15_p187g161 0.58 +0.7
164,541 - HP15_p187g161 0.59 -1.3
164,541 - HP15_p187g161 0.59 -0.4
164,541 - HP15_p187g161 0.59 -1.7
164,543 - HP15_p187g161 0.59 -0.2
164,558 - HP15_p187g161 0.61 +0.1
164,560 + HP15_p187g161 0.61 +0.5
164,581 + HP15_p187g161 0.63 +1.7
164,639 + HP15_p187g161 0.69 +0.1
164,639 + HP15_p187g161 0.69 +0.7
164,642 - HP15_p187g161 0.70 +0.6
164,647 - HP15_p187g161 0.70 -3.4
164,647 - HP15_p187g161 0.70 -0.7
164,677 + HP15_p187g161 0.73 +0.3
164,677 + HP15_p187g161 0.73 -1.5
164,677 + HP15_p187g161 0.73 +0.4
164,677 + HP15_p187g161 0.73 +1.2
164,685 - HP15_p187g161 0.74 +0.5
164,685 - HP15_p187g161 0.74 +0.0
164,685 - HP15_p187g161 0.74 +0.1
164,685 - HP15_p187g161 0.74 -0.8
164,685 - HP15_p187g161 0.74 +0.8
164,685 - HP15_p187g161 0.74 -1.0
164,685 - HP15_p187g161 0.74 -2.1
164,695 + HP15_p187g161 0.75 -2.7
164,745 - HP15_p187g161 0.80 -2.4
164,765 + HP15_p187g161 0.82 -0.4
164,847 + +1.3
164,847 + -1.5
164,859 - -0.1
164,859 - -1.7
164,860 + -1.7
164,867 - +0.6
164,917 + +0.8
164,988 + HP15_p187g162 0.20 -2.9
164,988 + HP15_p187g162 0.20 -1.4
164,996 - HP15_p187g162 0.24 +0.4
165,048 + HP15_p187g162 0.45 +0.7
165,050 + HP15_p187g162 0.46 +0.1
165,058 - HP15_p187g162 0.49 +0.2
165,077 + HP15_p187g162 0.57 +0.5
165,085 - HP15_p187g162 0.60 +0.5
165,120 + HP15_p187g162 0.74 -2.8
165,453 - +0.5
165,490 - +0.2
165,500 - +1.3
165,557 - +0.2
165,567 - +0.1
165,606 + +0.5
165,614 - +0.7
165,650 - HP15_p187g163 0.11 -1.8
165,650 - HP15_p187g163 0.11 +0.4
165,651 - HP15_p187g163 0.11 -2.1
165,688 + HP15_p187g163 0.14 +0.8
165,813 + HP15_p187g163 0.23 -0.0
165,838 - HP15_p187g163 0.25 +0.2
165,904 - HP15_p187g163 0.30 -0.5
165,924 + HP15_p187g163 0.32 +0.3
165,932 - HP15_p187g163 0.32 +0.6
166,022 + HP15_p187g163 0.39 +0.2
166,027 + HP15_p187g163 0.40 -3.2
166,040 + HP15_p187g163 0.41 -1.3

Or see this region's nucleotide sequence