Strain Fitness in Marinobacter adhaerens HP15 around HP15_4155

Experiment: Control growth in Pro99_seawater

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_4153 and HP15_4154 are separated by 78 nucleotidesHP15_4154 and HP15_4155 overlap by 23 nucleotidesHP15_4155 and HP15_4156 are separated by 92 nucleotides HP15_4153: HP15_4153 - hypothetical protein, at 4,390,046 to 4,390,633 _4153 HP15_4154: HP15_4154 - glycosyl transferase family protein, at 4,390,712 to 4,391,338 _4154 HP15_4155: HP15_4155 - hypothetical protein, at 4,391,316 to 4,391,984 _4155 HP15_4156: HP15_4156 - conserved hypothetical protein, at 4,392,077 to 4,392,934 _4156 Position (kb) 4391 4392Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 4390.344 kb on + strand, within HP15_4153at 4390.344 kb on + strand, within HP15_4153at 4390.359 kb on + strand, within HP15_4153at 4390.359 kb on + strand, within HP15_4153at 4390.367 kb on - strand, within HP15_4153at 4390.397 kb on - strand, within HP15_4153at 4390.401 kb on + strand, within HP15_4153at 4390.409 kb on - strand, within HP15_4153at 4390.409 kb on - strand, within HP15_4153at 4390.421 kb on + strand, within HP15_4153at 4390.425 kb on - strand, within HP15_4153at 4390.437 kb on - strand, within HP15_4153at 4390.456 kb on + strand, within HP15_4153at 4390.464 kb on - strand, within HP15_4153at 4390.555 kb on - strand, within HP15_4153at 4390.634 kb on - strandat 4390.634 kb on - strandat 4390.634 kb on - strandat 4390.639 kb on + strandat 4390.641 kb on - strandat 4390.772 kb on - strandat 4390.859 kb on + strand, within HP15_4154at 4390.867 kb on + strand, within HP15_4154at 4390.891 kb on + strand, within HP15_4154at 4390.891 kb on + strand, within HP15_4154at 4390.891 kb on + strand, within HP15_4154at 4390.899 kb on - strand, within HP15_4154at 4390.899 kb on - strand, within HP15_4154at 4390.899 kb on - strand, within HP15_4154at 4390.899 kb on - strand, within HP15_4154at 4390.899 kb on - strand, within HP15_4154at 4390.899 kb on - strand, within HP15_4154at 4390.899 kb on - strand, within HP15_4154at 4390.899 kb on - strand, within HP15_4154at 4390.899 kb on - strand, within HP15_4154at 4390.899 kb on - strand, within HP15_4154at 4390.936 kb on - strand, within HP15_4154at 4390.955 kb on + strand, within HP15_4154at 4390.957 kb on + strand, within HP15_4154at 4390.957 kb on - strand, within HP15_4154at 4390.976 kb on - strand, within HP15_4154at 4390.980 kb on + strand, within HP15_4154at 4391.035 kb on + strand, within HP15_4154at 4391.053 kb on + strand, within HP15_4154at 4391.061 kb on - strand, within HP15_4154at 4391.219 kb on - strand, within HP15_4154at 4391.288 kb on - strandat 4391.288 kb on - strandat 4391.305 kb on - strandat 4391.314 kb on + strandat 4391.323 kb on - strandat 4391.411 kb on + strand, within HP15_4155at 4391.679 kb on - strand, within HP15_4155at 4391.696 kb on - strand, within HP15_4155at 4391.755 kb on - strand, within HP15_4155at 4391.847 kb on - strand, within HP15_4155at 4391.851 kb on + strand, within HP15_4155at 4391.859 kb on - strand, within HP15_4155at 4391.923 kb on + strandat 4392.047 kb on - strandat 4392.172 kb on - strand, within HP15_4156at 4392.316 kb on - strand, within HP15_4156at 4392.316 kb on - strand, within HP15_4156at 4392.316 kb on - strand, within HP15_4156at 4392.368 kb on + strand, within HP15_4156at 4392.376 kb on - strand, within HP15_4156at 4392.376 kb on - strand, within HP15_4156at 4392.376 kb on - strand, within HP15_4156at 4392.376 kb on - strand, within HP15_4156at 4392.391 kb on - strand, within HP15_4156at 4392.445 kb on + strand, within HP15_4156at 4392.452 kb on + strand, within HP15_4156at 4392.453 kb on + strand, within HP15_4156at 4392.475 kb on + strand, within HP15_4156at 4392.480 kb on - strand, within HP15_4156at 4392.518 kb on + strand, within HP15_4156at 4392.548 kb on + strand, within HP15_4156at 4392.595 kb on + strand, within HP15_4156at 4392.601 kb on - strand, within HP15_4156at 4392.659 kb on - strand, within HP15_4156at 4392.684 kb on - strand, within HP15_4156at 4392.745 kb on + strand, within HP15_4156at 4392.745 kb on + strand, within HP15_4156at 4392.817 kb on - strand, within HP15_4156at 4392.827 kb on + strand, within HP15_4156at 4392.893 kb on + strandat 4392.916 kb on + strandat 4392.916 kb on + strandat 4392.921 kb on + strandat 4392.924 kb on - strandat 4392.924 kb on - strandat 4392.926 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Control growth in Pro99_seawater
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4,390,344 + HP15_4153 0.51 +0.9
4,390,344 + HP15_4153 0.51 -0.5
4,390,359 + HP15_4153 0.53 -2.3
4,390,359 + HP15_4153 0.53 -2.4
4,390,367 - HP15_4153 0.55 +0.0
4,390,397 - HP15_4153 0.60 -3.3
4,390,401 + HP15_4153 0.60 +0.3
4,390,409 - HP15_4153 0.62 -0.8
4,390,409 - HP15_4153 0.62 -1.0
4,390,421 + HP15_4153 0.64 +0.2
4,390,425 - HP15_4153 0.64 -2.9
4,390,437 - HP15_4153 0.66 -1.1
4,390,456 + HP15_4153 0.70 -0.0
4,390,464 - HP15_4153 0.71 -1.7
4,390,555 - HP15_4153 0.87 -0.8
4,390,634 - -1.5
4,390,634 - +0.3
4,390,634 - -0.9
4,390,639 + -0.3
4,390,641 - +0.7
4,390,772 - +0.1
4,390,859 + HP15_4154 0.23 +0.0
4,390,867 + HP15_4154 0.25 -0.4
4,390,891 + HP15_4154 0.29 -2.3
4,390,891 + HP15_4154 0.29 +0.3
4,390,891 + HP15_4154 0.29 -0.2
4,390,899 - HP15_4154 0.30 -2.0
4,390,899 - HP15_4154 0.30 +1.2
4,390,899 - HP15_4154 0.30 +0.3
4,390,899 - HP15_4154 0.30 -1.7
4,390,899 - HP15_4154 0.30 -2.7
4,390,899 - HP15_4154 0.30 -1.0
4,390,899 - HP15_4154 0.30 -0.4
4,390,899 - HP15_4154 0.30 +1.1
4,390,899 - HP15_4154 0.30 +0.4
4,390,899 - HP15_4154 0.30 -0.9
4,390,936 - HP15_4154 0.36 -0.6
4,390,955 + HP15_4154 0.39 +0.2
4,390,957 + HP15_4154 0.39 +0.6
4,390,957 - HP15_4154 0.39 +0.1
4,390,976 - HP15_4154 0.42 -0.8
4,390,980 + HP15_4154 0.43 -3.8
4,391,035 + HP15_4154 0.52 +0.3
4,391,053 + HP15_4154 0.54 +0.7
4,391,061 - HP15_4154 0.56 +0.6
4,391,219 - HP15_4154 0.81 +0.4
4,391,288 - +0.0
4,391,288 - +1.2
4,391,305 - +0.4
4,391,314 + +0.7
4,391,323 - +0.1
4,391,411 + HP15_4155 0.14 -2.2
4,391,679 - HP15_4155 0.54 -0.2
4,391,696 - HP15_4155 0.57 -1.7
4,391,755 - HP15_4155 0.66 +0.3
4,391,847 - HP15_4155 0.79 -2.8
4,391,851 + HP15_4155 0.80 -0.6
4,391,859 - HP15_4155 0.81 +0.1
4,391,923 + +0.6
4,392,047 - -3.4
4,392,172 - HP15_4156 0.11 +0.3
4,392,316 - HP15_4156 0.28 +0.6
4,392,316 - HP15_4156 0.28 -3.3
4,392,316 - HP15_4156 0.28 +0.2
4,392,368 + HP15_4156 0.34 -1.8
4,392,376 - HP15_4156 0.35 -0.2
4,392,376 - HP15_4156 0.35 +0.2
4,392,376 - HP15_4156 0.35 -3.7
4,392,376 - HP15_4156 0.35 +0.9
4,392,391 - HP15_4156 0.37 +0.2
4,392,445 + HP15_4156 0.43 +0.5
4,392,452 + HP15_4156 0.44 +0.9
4,392,453 + HP15_4156 0.44 -1.5
4,392,475 + HP15_4156 0.46 +0.9
4,392,480 - HP15_4156 0.47 -0.2
4,392,518 + HP15_4156 0.51 +0.4
4,392,548 + HP15_4156 0.55 +0.6
4,392,595 + HP15_4156 0.60 -1.3
4,392,601 - HP15_4156 0.61 +0.0
4,392,659 - HP15_4156 0.68 +0.8
4,392,684 - HP15_4156 0.71 -0.4
4,392,745 + HP15_4156 0.78 +0.7
4,392,745 + HP15_4156 0.78 -0.1
4,392,817 - HP15_4156 0.86 +1.8
4,392,827 + HP15_4156 0.87 -1.4
4,392,893 + +0.1
4,392,916 + -1.3
4,392,916 + -0.6
4,392,921 + +0.5
4,392,924 - +0.0
4,392,924 - -0.8
4,392,926 + +0.2

Or see this region's nucleotide sequence