Strain Fitness in Marinobacter adhaerens HP15 around HP15_3437

Experiment: Control growth in Pro99_seawater

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3435 and HP15_3437 overlap by 4 nucleotidesHP15_3437 and HP15_3436 are separated by 11 nucleotidesHP15_3436 and HP15_3438 are separated by 110 nucleotides HP15_3435: HP15_3435 - methyl-accepting chemotaxis protein, at 3,613,444 to 3,614,964 _3435 HP15_3437: HP15_3437 - electron transport SCO1/SenC-like protein, at 3,614,961 to 3,615,482 _3437 HP15_3436: HP15_3436 - hypothetical protein, at 3,615,494 to 3,615,607 _3436 HP15_3438: HP15_3438 - lipid A export ATP-binding/permease protein msbA, at 3,615,718 to 3,617,541 _3438 Position (kb) 3614 3615 3616Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3614.063 kb on + strand, within HP15_3435at 3614.177 kb on + strand, within HP15_3435at 3614.296 kb on + strand, within HP15_3435at 3614.337 kb on + strand, within HP15_3435at 3614.416 kb on + strand, within HP15_3435at 3614.416 kb on + strand, within HP15_3435at 3614.464 kb on + strand, within HP15_3435at 3614.724 kb on + strand, within HP15_3435at 3614.727 kb on - strand, within HP15_3435at 3614.813 kb on + strandat 3614.941 kb on - strandat 3615.051 kb on - strand, within HP15_3437at 3615.089 kb on - strand, within HP15_3437at 3615.094 kb on - strand, within HP15_3437at 3615.118 kb on + strand, within HP15_3437at 3615.126 kb on - strand, within HP15_3437at 3615.260 kb on + strand, within HP15_3437at 3615.509 kb on - strand, within HP15_3436at 3615.623 kb on - strandat 3615.734 kb on + strandat 3615.742 kb on - strandat 3615.761 kb on - strandat 3615.870 kb on - strandat 3615.870 kb on - strandat 3615.960 kb on + strand, within HP15_3438at 3616.009 kb on + strand, within HP15_3438at 3616.219 kb on + strand, within HP15_3438at 3616.252 kb on + strand, within HP15_3438at 3616.260 kb on - strand, within HP15_3438at 3616.260 kb on - strand, within HP15_3438at 3616.285 kb on - strand, within HP15_3438at 3616.295 kb on + strand, within HP15_3438at 3616.422 kb on + strand, within HP15_3438at 3616.422 kb on + strand, within HP15_3438at 3616.422 kb on + strand, within HP15_3438at 3616.422 kb on + strand, within HP15_3438at 3616.422 kb on + strand, within HP15_3438at 3616.422 kb on + strand, within HP15_3438at 3616.422 kb on + strand, within HP15_3438at 3616.430 kb on - strand, within HP15_3438at 3616.430 kb on - strand, within HP15_3438at 3616.430 kb on - strand, within HP15_3438at 3616.430 kb on - strand, within HP15_3438at 3616.430 kb on - strand, within HP15_3438

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Per-strain Table

Position Strand Gene LocusTag Fraction Control growth in Pro99_seawater
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3,614,063 + HP15_3435 0.41 +0.0
3,614,177 + HP15_3435 0.48 -0.8
3,614,296 + HP15_3435 0.56 -0.2
3,614,337 + HP15_3435 0.59 -1.8
3,614,416 + HP15_3435 0.64 +0.5
3,614,416 + HP15_3435 0.64 +0.6
3,614,464 + HP15_3435 0.67 -0.2
3,614,724 + HP15_3435 0.84 -3.3
3,614,727 - HP15_3435 0.84 +0.2
3,614,813 + +1.5
3,614,941 - -2.9
3,615,051 - HP15_3437 0.17 +0.4
3,615,089 - HP15_3437 0.25 -0.2
3,615,094 - HP15_3437 0.25 -0.4
3,615,118 + HP15_3437 0.30 -0.5
3,615,126 - HP15_3437 0.32 +0.5
3,615,260 + HP15_3437 0.57 -0.4
3,615,509 - HP15_3436 0.13 -3.3
3,615,623 - +0.1
3,615,734 + -2.1
3,615,742 - +0.3
3,615,761 - +0.6
3,615,870 - -0.3
3,615,870 - -3.8
3,615,960 + HP15_3438 0.13 -2.1
3,616,009 + HP15_3438 0.16 -0.1
3,616,219 + HP15_3438 0.27 +0.9
3,616,252 + HP15_3438 0.29 +0.0
3,616,260 - HP15_3438 0.30 +0.5
3,616,260 - HP15_3438 0.30 +1.4
3,616,285 - HP15_3438 0.31 +0.8
3,616,295 + HP15_3438 0.32 +1.7
3,616,422 + HP15_3438 0.39 +0.6
3,616,422 + HP15_3438 0.39 +0.4
3,616,422 + HP15_3438 0.39 +1.1
3,616,422 + HP15_3438 0.39 -0.2
3,616,422 + HP15_3438 0.39 -0.9
3,616,422 + HP15_3438 0.39 +0.0
3,616,422 + HP15_3438 0.39 -0.0
3,616,430 - HP15_3438 0.39 +0.4
3,616,430 - HP15_3438 0.39 -1.7
3,616,430 - HP15_3438 0.39 +0.1
3,616,430 - HP15_3438 0.39 +0.2
3,616,430 - HP15_3438 0.39 +0.5

Or see this region's nucleotide sequence