Strain Fitness in Marinobacter adhaerens HP15 around HP15_2432

Experiment: Control growth in Pro99_seawater

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2430 and HP15_2431 are separated by 28 nucleotidesHP15_2431 and HP15_2432 are separated by 104 nucleotidesHP15_2432 and HP15_2433 overlap by 4 nucleotidesHP15_2433 and HP15_2434 overlap by 4 nucleotides HP15_2430: HP15_2430 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 2,571,451 to 2,572,713 _2430 HP15_2431: HP15_2431 - transcriptional regulator, BolA superfamily protein, at 2,572,742 to 2,572,984 _2431 HP15_2432: HP15_2432 - NTP binding protein (contains STAS domain), at 2,573,089 to 2,573,421 _2432 HP15_2433: HP15_2433 - toluene tolerance family protein, at 2,573,418 to 2,574,107 _2433 HP15_2434: HP15_2434 - mammalian cell entry related domain protein, at 2,574,104 to 2,574,553 _2434 Position (kb) 2573 2574Strain fitness (log2 ratio) -3 -2 -1 0 1at 2573.056 kb on - strandat 2573.247 kb on + strand, within HP15_2432at 2573.247 kb on + strand, within HP15_2432at 2573.247 kb on + strand, within HP15_2432at 2573.262 kb on - strand, within HP15_2432at 2573.452 kb on - strandat 2573.601 kb on + strand, within HP15_2433at 2573.607 kb on - strand, within HP15_2433at 2573.607 kb on - strand, within HP15_2433at 2574.157 kb on - strand, within HP15_2434at 2574.179 kb on - strand, within HP15_2434at 2574.238 kb on + strand, within HP15_2434at 2574.256 kb on - strand, within HP15_2434at 2574.274 kb on - strand, within HP15_2434at 2574.361 kb on + strand, within HP15_2434at 2574.369 kb on - strand, within HP15_2434at 2574.369 kb on - strand, within HP15_2434

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Per-strain Table

Position Strand Gene LocusTag Fraction Control growth in Pro99_seawater
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2,573,056 - -0.9
2,573,247 + HP15_2432 0.47 -1.4
2,573,247 + HP15_2432 0.47 +0.0
2,573,247 + HP15_2432 0.47 -1.5
2,573,262 - HP15_2432 0.52 -2.2
2,573,452 - -0.2
2,573,601 + HP15_2433 0.27 -1.9
2,573,607 - HP15_2433 0.27 -0.0
2,573,607 - HP15_2433 0.27 -1.2
2,574,157 - HP15_2434 0.12 +0.2
2,574,179 - HP15_2434 0.17 -2.8
2,574,238 + HP15_2434 0.30 +0.4
2,574,256 - HP15_2434 0.34 -2.7
2,574,274 - HP15_2434 0.38 +0.7
2,574,361 + HP15_2434 0.57 +0.9
2,574,369 - HP15_2434 0.59 +0.5
2,574,369 - HP15_2434 0.59 -2.1

Or see this region's nucleotide sequence