Strain Fitness in Marinobacter adhaerens HP15 around HP15_1314

Experiment: Control growth in Pro99_seawater

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1313 and HP15_1314 are separated by 83 nucleotidesHP15_1314 and HP15_1315 overlap by 14 nucleotides HP15_1313: HP15_1313 - valyl-tRNA synthetase, at 1,372,939 to 1,375,791 _1313 HP15_1314: HP15_1314 - DNA polymerase III chi subunit, HolC, at 1,375,875 to 1,376,387 _1314 HP15_1315: HP15_1315 - leucyl aminopeptidase, at 1,376,374 to 1,377,867 _1315 Position (kb) 1375 1376 1377Strain fitness (log2 ratio) -2 -1 0 1at 1375.881 kb on - strandat 1376.117 kb on - strand, within HP15_1314at 1376.117 kb on - strand, within HP15_1314at 1376.121 kb on + strand, within HP15_1314at 1376.122 kb on - strand, within HP15_1314at 1376.272 kb on + strand, within HP15_1314at 1376.324 kb on + strand, within HP15_1314

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Per-strain Table

Position Strand Gene LocusTag Fraction Control growth in Pro99_seawater
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1,375,881 - -0.1
1,376,117 - HP15_1314 0.47 -2.2
1,376,117 - HP15_1314 0.47 +1.4
1,376,121 + HP15_1314 0.48 -1.5
1,376,122 - HP15_1314 0.48 -2.0
1,376,272 + HP15_1314 0.77 -0.9
1,376,324 + HP15_1314 0.88 -0.3

Or see this region's nucleotide sequence