Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS22075

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
5,045,569	-		HSERO_RS22070	0.17	+0.7
5,045,774	-		HSERO_RS22070	0.34	+1.3
5,045,796	+		HSERO_RS22070	0.36	+1.2
5,045,870	-		HSERO_RS22070	0.43	+1.3
5,045,885	-		HSERO_RS22070	0.44	+1.5
5,045,930	-		HSERO_RS22070	0.48	+2.6
5,045,976	-		HSERO_RS22070	0.52	+1.0
5,046,591	+				+1.5
5,046,625	-		HSERO_RS22075	0.11	+1.1
5,046,707	+		HSERO_RS22075	0.22	+0.9
5,046,755	+		HSERO_RS22075	0.29	+1.0
5,046,950	+		HSERO_RS22075	0.56	+1.6
5,046,963	-		HSERO_RS22075	0.58	+1.4
5,047,249	+				-0.1
5,047,257	-				+1.1
5,047,257	-				+0.8
5,047,272	+				-0.4
5,047,446	+		HSERO_RS22080	0.29	-0.6
5,047,561	-		HSERO_RS22080	0.49	+0.2
5,047,640	-		HSERO_RS22080	0.63	+0.6
5,047,646	+		HSERO_RS22080	0.64	+0.6
5,047,675	-		HSERO_RS22080	0.69	-0.3
5,047,745	-		HSERO_RS22080	0.81	-0.2
5,047,805	+				+1.1
5,047,814	-				+1.8
5,047,824	+				+0.1
5,047,919	+				+0.1
5,047,976	+				-0.2
5,047,982	+				+0.1
5,047,984	-				+0.5
5,048,027	-				+0.3
5,048,027	-				+0.3