Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS22060

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
5,042,838	-				+1.1
5,042,843	-				-0.4
5,042,858	-				-0.1
5,043,138	+				-1.6
5,043,221	-				+0.3
5,043,284	-				-0.0
5,043,393	+				+1.0
5,043,393	+				+1.6
5,043,434	-		HSERO_RS22060	0.12	+0.9
5,043,482	-		HSERO_RS22060	0.17	+0.5
5,043,549	-		HSERO_RS22060	0.23	+1.4
5,043,941	+		HSERO_RS22060	0.63	+1.6
5,043,951	+		HSERO_RS22060	0.64	+1.0
5,043,996	+		HSERO_RS22060	0.68	+1.5
5,044,526	-		HSERO_RS22065	0.18	+1.4
5,045,152	-		HSERO_RS22065	0.84	+1.0
5,045,202	-		HSERO_RS22065	0.89	+1.3
5,045,255	-				+1.4