Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS21710

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
4,970,849	-				-0.8
4,970,955	-				-0.4
4,970,958	+				+0.5
4,971,040	+		HSERO_RS21705	0.19	-0.2
4,971,119	-		HSERO_RS21705	0.31	+0.1
4,971,129	-		HSERO_RS21705	0.32	-0.1
4,971,129	-		HSERO_RS21705	0.32	-0.4
4,971,187	-		HSERO_RS21705	0.41	-0.2
4,971,259	+		HSERO_RS21705	0.52	+0.8
4,971,266	+		HSERO_RS21705	0.53	-0.5
4,971,266	+		HSERO_RS21705	0.53	+0.1
4,971,274	-		HSERO_RS21705	0.54	-0.3
4,971,298	-		HSERO_RS21705	0.58	-0.8
4,971,449	+		HSERO_RS21705	0.81	-0.0
4,971,518	+				-0.3
4,971,548	+				+0.0
4,971,556	-				-0.2
4,971,649	-				-0.4
4,971,676	+				-1.1
4,971,752	+				-0.7
4,972,080	+				+2.0
4,972,082	+		HSERO_RS21710	0.41	+0.6
4,972,233	+		HSERO_RS21710	0.63	+0.3
4,972,445	-				+0.8
4,972,450	-				+0.6
4,972,637	-				+0.0
4,972,779	-		HSERO_RS21715	0.16	+0.4
4,972,801	-		HSERO_RS21715	0.18	-0.5
4,972,926	+		HSERO_RS21715	0.27	-0.1
4,973,217	-		HSERO_RS21715	0.51	-0.4
4,973,284	+		HSERO_RS21715	0.56	+0.4