Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS21375

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
4,891,217	+				+0.8
4,891,331	-				+0.2
4,891,331	-				+2.6
4,891,483	+		HSERO_RS21370	0.40	-0.2
4,891,568	-		HSERO_RS21370	0.57	-2.1
4,891,823	+				+0.1
4,891,823	+				-0.5
4,891,996	-		HSERO_RS21375	0.26	+1.3
4,892,342	-		HSERO_RS21375	0.68	+2.1
4,892,497	+		HSERO_RS21375	0.86	+0.6
4,892,553	+				+2.1
4,892,588	+				-1.0
4,892,615	+				+0.9
4,892,914	-				+0.1
4,893,510	+		HSERO_RS21380	0.25	+0.2