Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS19265

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
4,417,802	+				+0.3
4,417,814	+				-2.0
4,417,814	-				-1.1
4,417,955	-		HSERO_RS19265	0.23	+2.0
4,418,702	+				+0.2
4,418,740	+				+0.4
4,418,897	+				+0.1
4,418,947	+				-0.4
4,418,949	+				-0.4
4,418,955	-				+0.2
4,419,114	+		HSERO_RS19270	0.17	+1.2
4,419,157	+		HSERO_RS19270	0.19	-1.1
4,419,209	+		HSERO_RS19270	0.22	-0.4
4,419,283	+		HSERO_RS19270	0.25	+0.2
4,419,295	+		HSERO_RS19270	0.26	-0.1
4,419,373	-		HSERO_RS19270	0.30	-2.7
4,419,423	+		HSERO_RS19270	0.33	-0.2
4,419,428	+		HSERO_RS19270	0.33	-0.4
4,419,428	+		HSERO_RS19270	0.33	-0.3
4,419,436	-		HSERO_RS19270	0.33	+0.4
4,419,502	-		HSERO_RS19270	0.37	-1.1
4,419,514	+		HSERO_RS19270	0.38	+0.5
4,419,717	+		HSERO_RS19270	0.48	+0.4