Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS15095

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
3,424,059	+				-0.1
3,424,065	-				-0.9
3,424,094	+				-0.6
3,424,102	-				+0.0
3,424,102	-				-0.1
3,424,359	-		HSERO_RS15090	0.35	-0.0
3,424,606	-		HSERO_RS15090	0.61	+0.1
3,424,689	+		HSERO_RS15090	0.69	-1.0
3,424,730	+		HSERO_RS15090	0.74	+0.3
3,424,751	+		HSERO_RS15090	0.76	+0.1
3,424,779	-		HSERO_RS15090	0.79	-0.2
3,424,869	+		HSERO_RS15090	0.88	+0.0
3,425,574	-		HSERO_RS15095	0.49	+0.4
3,425,628	+		HSERO_RS15095	0.54	+0.5
3,425,706	+		HSERO_RS15095	0.61	-0.7
3,425,860	+		HSERO_RS15095	0.76	-0.1
3,425,929	+		HSERO_RS15095	0.82	+1.5
3,426,165	+				-0.3
3,426,201	+				+1.1
3,426,221	+				-0.2
3,426,253	-				-0.0
3,426,269	-				-0.1
3,426,376	-				-0.2
3,426,400	+				-0.7
3,426,420	-				+0.7
3,426,529	-				-0.4
3,426,683	-				+1.0
3,426,743	-				-0.4
3,426,791	-				+0.7
3,426,798	-				-0.6
3,426,834	+				-1.2
3,426,867	+				-0.6
3,427,098	+				-0.1
3,427,106	-				-0.2
3,427,106	-				-0.2
3,427,107	+				-0.1