Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS14170

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
3,222,711	-				+1.1
3,222,732	-				-0.1
3,222,887	-		HSERO_RS14165	0.14	-0.5
3,222,905	-		HSERO_RS14165	0.16	+1.0
3,223,029	+		HSERO_RS14165	0.30	-0.8
3,223,051	+		HSERO_RS14165	0.32	+0.2
3,223,082	+		HSERO_RS14165	0.36	-0.3
3,223,371	-		HSERO_RS14165	0.68	+1.0
3,223,477	+		HSERO_RS14165	0.80	-0.3
3,223,669	+				-1.1
3,223,835	-		HSERO_RS14170	0.51	+0.1
3,223,845	-		HSERO_RS14170	0.54	-0.0
3,223,916	-		HSERO_RS14170	0.76	+1.5
3,223,983	-				+0.0
3,224,013	+				+0.1
3,224,072	-				+1.2
3,224,288	+				-0.4
3,224,339	+				+1.1
3,224,388	-				-2.5
3,224,568	-		HSERO_RS14175	0.45	-0.3
3,224,905	-				-1.8