Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS13770

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
3,129,077	+		HSERO_RS13765	0.21	-0.3
3,129,096	+		HSERO_RS13765	0.23	+1.2
3,129,114	-		HSERO_RS13765	0.24	-2.6
3,129,149	+		HSERO_RS13765	0.27	+0.1
3,129,285	+		HSERO_RS13765	0.39	+0.2
3,129,288	-		HSERO_RS13765	0.40	+1.3
3,129,290	+		HSERO_RS13765	0.40	+0.8
3,129,367	+		HSERO_RS13765	0.47	+0.0
3,129,399	+		HSERO_RS13765	0.49	+0.7
3,129,465	-		HSERO_RS13765	0.55	-0.7
3,129,681	-		HSERO_RS13765	0.74	+0.2
3,129,764	-		HSERO_RS13765	0.82	-0.4
3,129,795	-		HSERO_RS13765	0.84	+0.9
3,129,948	+				+0.3
3,130,068	-				+0.2
3,130,174	-		HSERO_RS13770	0.21	+1.3
3,130,435	-		HSERO_RS13770	0.52	-0.1
3,130,888	+				-0.6
3,131,046	+		HSERO_RS13775	0.19	-0.3
3,131,046	+		HSERO_RS13775	0.19	-0.5
3,131,059	-		HSERO_RS13775	0.21	-0.1
3,131,464	-		HSERO_RS13775	0.58	-0.0
3,131,482	+		HSERO_RS13775	0.60	+0.0
3,131,726	-		HSERO_RS13775	0.83	+0.3
3,131,796	-				+0.3
3,131,796	-		HSERO_RS13775	0.89	-0.8