Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS12470

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
2,836,764	+		HSERO_RS12465	0.11	-0.2
2,837,013	+		HSERO_RS12465	0.33	+1.1
2,837,092	+		HSERO_RS12465	0.41	-0.5
2,837,210	+		HSERO_RS12465	0.51	+0.3
2,837,218	-		HSERO_RS12465	0.52	+0.1
2,837,281	-		HSERO_RS12465	0.58	-0.3
2,837,292	+		HSERO_RS12465	0.59	-1.2
2,837,411	-		HSERO_RS12465	0.70	-0.5
2,837,420	+		HSERO_RS12465	0.71	+0.3
2,837,856	-		HSERO_RS12470	0.25	-0.3
2,837,975	+		HSERO_RS12470	0.51	+1.5
2,838,320	-				+1.1
2,838,345	+				+0.4
2,838,392	-				-0.3
2,838,983	+		HSERO_RS12475	0.46	+0.2