Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS11535

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
2,606,028	+		HSERO_RS11525	0.85	-0.4
2,606,262	+				+0.1
2,606,297	+				-0.2
2,606,594	-				+0.2
2,606,946	+				+0.1
2,606,988	+				+0.3
2,607,028	+		HSERO_RS11535	0.12	+0.8
2,607,112	-		HSERO_RS11535	0.24	+0.6
2,607,166	-		HSERO_RS11535	0.32	+0.4
2,607,320	-		HSERO_RS11535	0.54	-0.1
2,607,524	+		HSERO_RS11535	0.83	+1.7
2,607,640	-				-0.2
2,607,652	-				+0.3
2,607,852	-				+0.1
2,607,893	+				+0.2
2,608,193	-		HSERO_RS11540	0.32	-0.0
2,608,342	+		HSERO_RS11540	0.47	-0.1
2,608,408	+		HSERO_RS11540	0.53	+0.2