Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS10315

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
2,324,305	-		HSERO_RS10310	0.79	+2.3
2,324,347	+		HSERO_RS10310	0.81	+1.6
2,324,554	-				+1.8
2,324,602	-				+2.0
2,324,616	+				+2.1
2,324,735	+				+1.8
2,324,735	+				+1.9
2,324,764	+				+1.7
2,324,805	-				-0.5
2,324,994	-				+3.2
2,325,096	+		HSERO_RS10315	0.46	-0.4
2,325,106	+		HSERO_RS10315	0.48	+1.6
2,325,106	+		HSERO_RS10315	0.48	+1.5
2,325,249	-		HSERO_RS10315	0.89	+1.3
2,325,258	-				+0.9
2,325,258	-				+1.7
2,325,528	+		HSERO_RS10320	0.16	-0.9
2,325,849	-		HSERO_RS10320	0.58	-0.8
2,326,126	+				-2.2