Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS10285

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
2,316,893	-		HSERO_RS10275	0.68	+1.7
2,316,989	-		HSERO_RS10275	0.78	+1.7
2,317,109	-		HSERO_RS10275	0.90	+1.6
2,317,237	+				+0.7
2,317,292	+		HSERO_RS10280	0.10	+1.3
2,317,605	-				-0.2
2,317,853	+				+1.5
2,317,919	-				+2.8
2,318,222	-		HSERO_RS10285	0.26	+0.7
2,318,275	+		HSERO_RS10285	0.30	+1.3
2,318,518	-				+1.6
2,318,601	-		HSERO_RS10285	0.55	+1.4
2,318,950	+		HSERO_RS10285	0.82	+1.7
2,319,053	+		HSERO_RS10285	0.90	+1.7
2,319,053	+		HSERO_RS10285	0.90	+1.8
2,319,434	+		HSERO_RS10290	0.45	+2.1
2,319,489	-		HSERO_RS10290	0.58	+1.3
2,319,502	+				+1.9
2,319,554	-		HSERO_RS10290	0.72	+1.5
2,319,659	+				+1.7
2,319,716	+				+1.7
2,319,724	-				+1.7