Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS10230

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
2,306,302	-		HSERO_RS10225	0.61	+1.6
2,306,340	-		HSERO_RS10225	0.63	+1.1
2,306,363	-		HSERO_RS10225	0.64	+2.4
2,306,435	+		HSERO_RS10225	0.67	+2.2
2,306,912	+		HSERO_RS10225	0.87	+0.6
2,307,111	+				+0.9
2,307,143	-				+1.3
2,307,427	-		HSERO_RS10230	0.17	+1.3
2,307,427	-		HSERO_RS10230	0.17	+1.3
2,307,458	-		HSERO_RS10230	0.19	+1.1
2,307,661	+		HSERO_RS10230	0.37	+1.1
2,307,755	+		HSERO_RS10230	0.46	+1.6
2,307,910	+		HSERO_RS10230	0.59	+1.5
2,307,956	+		HSERO_RS10230	0.63	+0.7
2,308,130	-		HSERO_RS10230	0.79	+1.1
2,308,157	-		HSERO_RS10230	0.81	+1.4
2,308,341	+				+0.9
2,308,867	+		HSERO_RS10235	0.28	+0.7
2,309,110	-		HSERO_RS10235	0.45	+0.1
2,309,333	-				-0.5