Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS10155

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
2,292,756	-		HSERO_RS10150	0.42	+2.1
2,292,859	-		HSERO_RS10150	0.49	+2.3
2,293,459	-		HSERO_RS10150	0.89	+1.8
2,293,558	+				+0.9
2,294,023	-		HSERO_RS10155	0.46	+1.0
2,294,087	+		HSERO_RS10155	0.54	+0.0
2,294,310	+		HSERO_RS10155	0.82	+0.7
2,294,318	-		HSERO_RS10155	0.83	+0.0
2,294,647	+		HSERO_RS10160	0.26	+1.5
2,294,730	+		HSERO_RS10160	0.37	+1.2
2,294,805	+		HSERO_RS10160	0.47	+1.3
2,294,815	+		HSERO_RS10160	0.48	+1.3
2,295,322	+				+1.2
2,295,433	+		HSERO_RS10165	0.33	+1.7
2,295,433	+		HSERO_RS10165	0.33	+1.8