Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS10115

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
2,283,764	-		HSERO_RS10110	0.53	+0.8
2,283,876	+		HSERO_RS10110	0.60	-0.5
2,284,185	-		HSERO_RS10110	0.79	+0.2
2,284,427	+				+0.4
2,284,952	+		HSERO_RS10115	0.25	+1.7
2,285,115	-		HSERO_RS10115	0.44	-0.1
2,285,301	-		HSERO_RS10115	0.65	+1.2
2,285,315	+		HSERO_RS10115	0.67	+1.4
2,285,457	-		HSERO_RS10115	0.83	+1.4
2,285,854	-		HSERO_RS10120	0.42	+1.5
2,286,074	-		HSERO_RS10120	0.78	+0.6
2,286,195	+				-1.5
2,286,200	+				-0.2
2,286,203	-				-0.6
2,286,237	+				+0.7
2,286,245	-				-0.7
2,286,417	-		HSERO_RS10125	0.14	-0.5
2,286,501	-		HSERO_RS10125	0.22	+0.2