Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS10070

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
2,277,730	+		HSERO_RS10065	0.75	-0.1
2,277,779	+		HSERO_RS10065	0.81	-1.0
2,278,024	+				+0.1
2,278,204	-		HSERO_RS10070	0.46	+1.1
2,278,311	+		HSERO_RS10070	0.73	+0.4
2,278,579	+				-0.1
2,278,633	-				-0.1
2,278,810	+				+0.1
2,278,924	+				+0.3
2,278,968	-		HSERO_RS10080	0.63	-0.3
2,278,978	-		HSERO_RS10080	0.68	-0.3
2,279,191	-				-0.5
2,279,226	-				+0.6
2,279,234	+				-0.3
2,279,236	-				-0.1
2,279,258	-				-0.5