Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS09055

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
2,053,313	+		HSERO_RS09050	0.24	+0.4
2,053,792	+		HSERO_RS09050	0.64	+0.7
2,053,927	-		HSERO_RS09050	0.75	+0.9
2,054,025	-		HSERO_RS09050	0.83	+0.0
2,054,105	+				-0.2
2,054,219	-				+0.9
2,054,224	-				+0.2
2,054,416	+				+0.2
2,054,437	-		HSERO_RS09055	0.58	+0.5
2,054,783	-		HSERO_RS09060	0.19	+1.1
2,054,918	+		HSERO_RS09060	0.46	+0.0
2,054,918	+		HSERO_RS09060	0.46	-1.8
2,055,074	-		HSERO_RS09060	0.77	-0.5
2,055,158	+				-1.8