Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS07280

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
1,665,199	-		HSERO_RS07275	0.53	+0.4
1,665,199	-		HSERO_RS07275	0.53	-0.7
1,665,396	+		HSERO_RS07275	0.68	+0.6
1,665,404	+		HSERO_RS07275	0.68	-0.3
1,665,593	+		HSERO_RS07275	0.83	+2.6
1,666,138	-		HSERO_RS07280	0.28	+0.7
1,666,146	+		HSERO_RS07280	0.30	+0.6
1,666,380	-		HSERO_RS07280	0.83	+0.5
1,666,472	+				-0.8
1,666,515	-				-0.6
1,666,911	+				+0.8
1,666,916	-				+1.2
1,666,987	+				-0.7
1,666,987	+				-1.1
1,666,995	-				-0.6
1,666,997	+				-1.3
1,667,005	-				-1.3
1,667,167	+				+0.1
1,667,176	+				-0.1