Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS03840

Experiment: Dictyostellum sp.mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-1
847,011	-				-0.3
847,175	-				-0.5
847,393	-				+0.5
847,414	+				+0.1
847,414	+				+0.3
847,422	-				-0.7
847,490	+				-0.1
847,598	-				-0.2
847,745	-				-0.1
847,753	+				-0.5
847,780	+				-1.5
847,885	+				-0.1
847,975	-				+0.5
848,065	+				-0.8
848,073	-				-0.0
848,080	-				-0.2
848,164	+		HSERO_RS03840	0.17	-0.5
848,535	+		HSERO_RS03840	0.49	+1.1
848,810	+		HSERO_RS03840	0.72	+1.0
848,941	+		HSERO_RS03840	0.84	+0.2
849,144	-				-1.1
849,444	-				-0.6
849,639	-				+0.2
849,698	-				+0.1
849,708	+				+0.1
849,708	-				-0.3
849,716	-				-0.6
849,736	+				+0.8
849,833	-				+0.0
849,871	-				+0.7
850,000	+				-0.2