Strain Fitness in Shewanella oneidensis MR-1 around SO4276

Experiment: minimal media, aerobic, 1G configuration

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	minimal media, aerobic, 1G configuration
4,453,776	+		SO4274	0.71	-0.0
4,453,776	+		SO4274	0.71	-0.1
4,453,776	+		SO4274	0.71	-0.3
4,453,776	+		SO4274	0.71	-0.5
4,453,776	+		SO4274	0.71	-1.0
4,453,776	+		SO4274	0.71	-0.9
4,453,777	+		SO4274	0.71	-0.4
4,453,778	-		SO4274	0.71	+0.4
4,453,782	+		SO4274	0.71	+1.0
4,453,784	-		SO4274	0.72	-0.0
4,453,784	-		SO4274	0.72	-0.1
4,453,784	-		SO4274	0.72	+0.1
4,453,784	-		SO4274	0.72	-0.1
4,453,784	-		SO4274	0.72	-0.2
4,453,785	-		SO4274	0.72	-0.0
4,453,785	-		SO4274	0.72	+0.8
4,453,785	-		SO4274	0.72	-0.3
4,453,790	-		SO4274	0.72	-0.6
4,453,826	-		SO4274	0.77	-0.1
4,453,827	+		SO4274	0.77	-0.2
4,453,832	+		SO4274	0.78	+0.3
4,453,837	-		SO4274	0.78	-0.6
4,453,839	+		SO4274	0.78	+0.7
4,453,839	+		SO4274	0.78	-0.1
4,453,839	+		SO4274	0.78	-0.0
4,453,839	+		SO4274	0.78	-0.5
4,453,839	+		SO4274	0.78	+1.6
4,453,845	+		SO4274	0.79	+0.6
4,453,847	-		SO4274	0.79	-0.0
4,453,847	-		SO4274	0.79	-0.0
4,453,847	-		SO4274	0.79	+0.6
4,453,847	-		SO4274	0.79	+1.0
4,453,847	-		SO4274	0.79	-1.2
4,453,848	-		SO4274	0.80	+0.3
4,453,851	-		SO4274	0.80	-0.2
4,453,851	-		SO4274	0.80	+1.0
4,453,859	+		SO4274	0.81	-0.4
4,453,905	-		SO4274	0.87	-1.5
4,453,930	-		SO4274	0.90	-0.3
4,453,932	+				+1.0
4,453,932	+				+1.4
4,453,932	+				-0.0
4,453,932	+				-2.0
4,453,932	+				-0.0
4,453,932	+				-0.3
4,453,932	+				-0.1
4,453,932	+				-0.0
4,453,932	+				+0.3
4,453,932	+				+1.1
4,453,932	+				+0.2
4,453,932	+				-0.4
4,453,932	+				+0.2
4,453,932	+				+0.1
4,453,932	+				+0.6
4,453,932	+				+0.6
4,453,932	+				-0.1
4,453,933	+				+0.7
4,453,940	-				-0.6
4,453,940	-				-0.6
4,453,940	-				+0.0
4,453,940	-				+0.1
4,453,940	-				-0.7
4,453,940	-				-0.4
4,453,944	+				-0.0
4,453,944	+				-0.8
4,453,951	+				-1.3
4,453,951	+				+1.3
4,453,952	-				-0.0
4,453,954	+				-0.3
4,453,954	+				+1.6
4,453,959	-				+0.2
4,453,962	-				-0.5
4,453,962	-				+0.5
4,453,966	+				+0.1
4,453,966	+				-0.8
4,454,016	-				-0.5
4,454,034	-				-0.1
4,454,043	+				-0.5
4,454,102	+				+1.1
4,454,166	+				-0.3
4,454,172	+				+0.4
4,454,172	+				-0.0
4,454,172	+				+0.1
4,454,172	+				-0.3
4,454,172	+				-0.4
4,454,177	+				+0.6
4,454,177	+				+0.8
4,454,179	-				-0.3
4,454,180	-				-0.2
4,454,180	-				+0.2
4,454,180	-				+0.4
4,454,180	-				-0.0
4,454,182	+				+0.6
4,454,182	+				-0.8
4,454,182	+				+3.0
4,454,182	+				+0.2
4,454,182	+				+1.3
4,454,182	+				+0.5
4,454,182	+				+0.5
4,454,182	+				-0.0
4,454,182	+				-0.1
4,454,182	+				-0.2
4,454,182	+				+0.7
4,454,182	+				-0.2
4,454,182	+				-0.4
4,454,183	+				-0.1
4,454,183	+				+0.2
4,454,185	-				+0.1
4,454,189	-				-1.2
4,454,190	-				+0.5
4,454,190	-				+0.0
4,454,190	-				+0.3
4,454,190	-				-0.8
4,454,190	-				+0.5
4,454,190	-				+0.4
4,454,191	-				-0.1
4,454,191	-				+0.2
4,454,191	-				+0.1
4,454,201	+		SO4275	0.10	+0.8
4,454,214	+		SO4275	0.16	+0.4
4,454,216	+		SO4275	0.16	+0.5
4,454,216	+		SO4275	0.16	+0.6
4,454,216	+		SO4275	0.16	+0.2
4,454,216	+		SO4275	0.16	+0.1
4,454,216	+		SO4275	0.16	+0.6
4,454,216	+		SO4275	0.16	+2.3
4,454,216	+		SO4275	0.16	+1.0
4,454,216	+		SO4275	0.16	+1.3
4,454,216	+		SO4275	0.16	+0.5
4,454,216	+		SO4275	0.16	-0.6
4,454,216	+		SO4275	0.16	-0.0
4,454,216	+		SO4275	0.16	-1.0
4,454,216	+		SO4275	0.16	+1.0
4,454,216	+		SO4275	0.16	+0.6
4,454,216	+		SO4275	0.16	+0.2
4,454,216	+		SO4275	0.16	-0.3
4,454,216	+		SO4275	0.16	-0.5
4,454,216	+		SO4275	0.16	-0.5
4,454,224	-		SO4275	0.20	-0.0
4,454,224	-		SO4275	0.20	+0.3
4,454,224	-		SO4275	0.20	-0.3
4,454,224	-		SO4275	0.20	-1.9
4,454,224	-		SO4275	0.20	-0.6
4,454,224	-		SO4275	0.20	+0.1
4,454,224	-		SO4275	0.20	-0.0
4,454,224	-		SO4275	0.20	+0.3
4,454,224	-		SO4275	0.20	-0.5
4,454,224	-		SO4275	0.20	-0.3
4,454,224	-		SO4275	0.20	-0.1
4,454,224	-		SO4275	0.20	-0.6
4,454,224	-		SO4275	0.20	-0.1
4,454,224	-		SO4275	0.20	+0.3
4,454,224	-		SO4275	0.20	-2.6
4,454,230	-		SO4275	0.22	-1.0
4,454,290	-		SO4275	0.46	-0.6
4,454,326	+		SO4275	0.61	-2.1
4,454,336	-		SO4275	0.65	+0.0
4,454,337	-		SO4275	0.65	-0.4
4,454,346	-		SO4275	0.69	+0.1
4,454,603	+				-0.2
4,454,608	-				-0.6
4,454,611	-				+0.7
4,454,620	+				+0.2
4,454,621	-				-1.3
4,454,628	-				+0.3
4,454,637	+				+0.4
4,454,649	+				+0.2
4,454,649	+				-0.2
4,454,649	+				+0.4
4,454,649	+				+0.2
4,454,649	+				+0.2
4,454,649	+				-0.5
4,454,657	-				-0.3
4,454,657	-				+0.2
4,454,657	-				-0.0
4,454,657	-				+0.7
4,454,658	-				+0.4
4,454,678	+				-0.5
4,454,686	-				+0.3
4,454,728	-				-0.6
4,454,745	-				-0.3
4,454,746	-				+1.0
4,454,756	-				+0.1
4,454,760	+				+0.2
4,454,768	-				-1.2
4,454,770	+				-0.2
4,454,778	-				-0.1
4,454,783	-				-0.3
4,454,810	+		SO4276	0.14	-0.1
4,454,852	-		SO4276	0.30	+0.6
4,454,894	-		SO4276	0.46	+0.6
4,454,919	+		SO4276	0.56	+0.1
4,454,949	-		SO4276	0.67	+0.8
4,455,093	+				+0.9
4,455,145	+				-0.2
4,455,154	-				-0.0
4,455,163	+				-0.7
4,455,209	-				-1.2
4,455,335	+				+1.0
4,455,343	-				-0.4
4,455,343	-				+0.2
4,455,414	-				-0.0
4,455,453	+				-0.6
4,455,453	+				+0.6
4,455,461	-				+0.1
4,455,461	-				-0.5
4,455,461	-				+0.1
4,455,461	-				+1.2
4,455,461	-				-0.7
4,455,461	-				-0.0
4,455,463	+				+1.0
4,455,463	+				+1.1
4,455,463	-				+0.2
4,455,485	-				+0.4
4,455,517	-				-1.4
4,455,532	+				+0.2
4,455,540	-				-1.0
4,455,541	-				-0.5
4,455,541	-				+0.8
4,455,567	+				+2.2
4,455,589	+				-0.3
4,455,595	-				-0.7
4,455,595	-				-0.7
4,455,597	-				-0.3
4,455,597	-				-2.2
4,455,597	-				+1.2
4,455,597	-				+0.3
4,455,597	-				+0.2
4,455,600	-				+2.1
4,455,701	+				-0.6
4,455,709	-				-0.3
4,455,719	-				-0.5
4,455,789	-				+1.2
4,455,845	+				+0.6
4,455,849	+				+2.3
4,455,872	-				+1.0
4,455,927	+				-0.4
4,455,933	-				-0.1
4,455,936	-				-1.0
4,455,958	+				-1.3
4,455,958	+				-0.0
4,455,958	+				-0.1
4,455,958	+				+0.1
4,455,958	+				-0.4
4,455,958	+				-1.5
4,455,958	+				+0.1
4,455,958	+				-0.3
4,455,958	+				-0.8
4,455,966	-				+1.0
4,455,966	-				+1.6
4,455,966	-				+0.4
4,455,966	-				-0.3
4,455,966	-				+1.4
4,455,966	-				+0.9
4,455,980	-				+0.1
4,455,980	-				+0.3
4,455,990	-				-1.4