Strain Fitness in Marinobacter adhaerens HP15 around HP15_2144

Experiment: Mixed culture; Synechococcus str. WH8102 10:1 starting OD to HP15

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2143 and HP15_2144 are separated by 292 nucleotidesHP15_2144 and HP15_2145 are separated by 11 nucleotidesHP15_2145 and HP15_2146 are separated by 89 nucleotides HP15_2143: HP15_2143 - conserved hypothetical protein, at 2,245,274 to 2,246,383 _2143 HP15_2144: HP15_2144 - redoxin domain protein, at 2,246,676 to 2,247,179 _2144 HP15_2145: HP15_2145 - conserved hypothetical protein, at 2,247,191 to 2,247,715 _2145 HP15_2146: HP15_2146 - conserved hypothetical protein, secreted, at 2,247,805 to 2,248,557 _2146 Position (kb) 2246 2247 2248Strain fitness (log2 ratio) -1 0 1 2at 2245.850 kb on + strand, within HP15_2143at 2245.857 kb on + strand, within HP15_2143at 2246.058 kb on + strand, within HP15_2143at 2246.158 kb on + strand, within HP15_2143at 2246.178 kb on - strand, within HP15_2143at 2246.217 kb on + strand, within HP15_2143at 2246.217 kb on + strand, within HP15_2143at 2246.230 kb on - strand, within HP15_2143at 2246.257 kb on - strand, within HP15_2143at 2246.404 kb on + strandat 2246.412 kb on - strandat 2246.793 kb on + strand, within HP15_2144at 2246.925 kb on + strand, within HP15_2144at 2247.127 kb on - strand, within HP15_2144at 2247.127 kb on - strand, within HP15_2144at 2247.208 kb on + strandat 2247.213 kb on + strandat 2247.213 kb on + strandat 2247.213 kb on + strandat 2247.221 kb on - strandat 2247.221 kb on - strandat 2247.404 kb on + strand, within HP15_2145at 2247.595 kb on + strand, within HP15_2145at 2247.697 kb on + strandat 2247.784 kb on - strandat 2247.880 kb on + strandat 2247.944 kb on - strand, within HP15_2146at 2247.979 kb on - strand, within HP15_2146at 2248.006 kb on - strand, within HP15_2146at 2248.038 kb on - strand, within HP15_2146at 2248.110 kb on - strand, within HP15_2146at 2248.137 kb on + strand, within HP15_2146at 2248.158 kb on - strand, within HP15_2146

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Per-strain Table

Position Strand Gene LocusTag Fraction Mixed culture; Synechococcus str. WH8102 10:1 starting OD to HP15
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2,245,850 + HP15_2143 0.52 +1.2
2,245,857 + HP15_2143 0.53 +2.1
2,246,058 + HP15_2143 0.71 +1.7
2,246,158 + HP15_2143 0.80 +1.2
2,246,178 - HP15_2143 0.81 +1.2
2,246,217 + HP15_2143 0.85 -1.0
2,246,217 + HP15_2143 0.85 +0.2
2,246,230 - HP15_2143 0.86 -0.7
2,246,257 - HP15_2143 0.89 +0.0
2,246,404 + -1.5
2,246,412 - -0.1
2,246,793 + HP15_2144 0.23 -0.2
2,246,925 + HP15_2144 0.49 +1.3
2,247,127 - HP15_2144 0.89 -0.5
2,247,127 - HP15_2144 0.89 -1.3
2,247,208 + +0.7
2,247,213 + +1.2
2,247,213 + +0.9
2,247,213 + -0.1
2,247,221 - -0.5
2,247,221 - +0.9
2,247,404 + HP15_2145 0.41 +0.1
2,247,595 + HP15_2145 0.77 +0.6
2,247,697 + -0.5
2,247,784 - +0.5
2,247,880 + +1.2
2,247,944 - HP15_2146 0.18 -0.3
2,247,979 - HP15_2146 0.23 -0.5
2,248,006 - HP15_2146 0.27 +0.7
2,248,038 - HP15_2146 0.31 -0.1
2,248,110 - HP15_2146 0.41 -0.5
2,248,137 + HP15_2146 0.44 +0.2
2,248,158 - HP15_2146 0.47 -1.1

Or see this region's nucleotide sequence