Experiment: KB with Anisodamine Hydrobromide () 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4239 and Psyr_4240 are separated by 10 nucleotides Psyr_4240 and Psyr_4241 are separated by 10 nucleotides Psyr_4241 and Psyr_4242 overlap by 1 nucleotides
Psyr_4239: Psyr_4239 - Binding-protein-dependent transport systems inner membrane component, at 5,051,620 to 5,052,630
_4239
Psyr_4240: Psyr_4240 - Binding-protein-dependent transport systems inner membrane component, at 5,052,641 to 5,053,552
_4240
Psyr_4241: Psyr_4241 - Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal, at 5,053,563 to 5,054,531
_4241
Psyr_4242: Psyr_4242 - Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal, at 5,054,531 to 5,055,505
_4242
Position (kb) 5052
5053
5054 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5051.681 kb on + strand at 5051.682 kb on - strand at 5051.806 kb on + strand, within Psyr_4239 at 5051.806 kb on + strand, within Psyr_4239 at 5051.815 kb on + strand, within Psyr_4239 at 5051.815 kb on + strand, within Psyr_4239 at 5051.815 kb on + strand, within Psyr_4239 at 5051.815 kb on + strand, within Psyr_4239 at 5051.816 kb on - strand, within Psyr_4239 at 5051.816 kb on - strand, within Psyr_4239 at 5051.816 kb on - strand, within Psyr_4239 at 5051.824 kb on + strand, within Psyr_4239 at 5051.824 kb on + strand, within Psyr_4239 at 5051.825 kb on - strand, within Psyr_4239 at 5051.825 kb on - strand, within Psyr_4239 at 5051.825 kb on - strand, within Psyr_4239 at 5052.040 kb on + strand, within Psyr_4239 at 5052.137 kb on - strand, within Psyr_4239 at 5052.137 kb on - strand, within Psyr_4239 at 5052.137 kb on - strand, within Psyr_4239 at 5052.137 kb on - strand, within Psyr_4239 at 5052.243 kb on - strand, within Psyr_4239 at 5052.316 kb on + strand, within Psyr_4239 at 5052.316 kb on + strand, within Psyr_4239 at 5052.316 kb on + strand, within Psyr_4239 at 5052.317 kb on - strand, within Psyr_4239 at 5052.317 kb on - strand, within Psyr_4239 at 5052.317 kb on - strand, within Psyr_4239 at 5052.317 kb on - strand, within Psyr_4239 at 5052.317 kb on - strand, within Psyr_4239 at 5052.317 kb on - strand, within Psyr_4239 at 5052.317 kb on - strand, within Psyr_4239 at 5052.363 kb on - strand, within Psyr_4239 at 5052.363 kb on - strand, within Psyr_4239 at 5052.652 kb on + strand at 5052.687 kb on - strand at 5053.169 kb on + strand, within Psyr_4240 at 5053.169 kb on + strand, within Psyr_4240 at 5053.169 kb on + strand, within Psyr_4240 at 5053.169 kb on + strand, within Psyr_4240 at 5053.169 kb on + strand, within Psyr_4240 at 5053.169 kb on + strand, within Psyr_4240 at 5053.169 kb on + strand, within Psyr_4240 at 5053.169 kb on + strand, within Psyr_4240 at 5053.170 kb on - strand, within Psyr_4240 at 5053.170 kb on - strand, within Psyr_4240 at 5053.170 kb on - strand, within Psyr_4240 at 5053.170 kb on - strand, within Psyr_4240 at 5053.170 kb on - strand, within Psyr_4240 at 5053.170 kb on - strand, within Psyr_4240 at 5053.170 kb on - strand, within Psyr_4240 at 5053.170 kb on - strand, within Psyr_4240 at 5053.170 kb on - strand, within Psyr_4240 at 5053.170 kb on - strand, within Psyr_4240 at 5053.170 kb on - strand, within Psyr_4240 at 5053.217 kb on + strand, within Psyr_4240 at 5053.217 kb on + strand, within Psyr_4240 at 5053.218 kb on - strand, within Psyr_4240 at 5053.374 kb on + strand, within Psyr_4240 at 5053.374 kb on + strand, within Psyr_4240 at 5053.424 kb on + strand, within Psyr_4240 at 5053.424 kb on + strand, within Psyr_4240 at 5053.424 kb on + strand, within Psyr_4240 at 5053.425 kb on - strand, within Psyr_4240 at 5053.425 kb on - strand, within Psyr_4240 at 5053.618 kb on + strand at 5053.663 kb on + strand, within Psyr_4241 at 5053.663 kb on + strand, within Psyr_4241 at 5053.664 kb on - strand, within Psyr_4241 at 5053.875 kb on + strand, within Psyr_4241 at 5053.875 kb on + strand, within Psyr_4241 at 5053.875 kb on + strand, within Psyr_4241 at 5053.876 kb on - strand, within Psyr_4241 at 5053.876 kb on - strand, within Psyr_4241 at 5053.876 kb on - strand, within Psyr_4241 at 5053.876 kb on - strand, within Psyr_4241 at 5053.876 kb on - strand, within Psyr_4241 at 5053.876 kb on - strand, within Psyr_4241 at 5053.876 kb on - strand, within Psyr_4241 at 5053.876 kb on - strand, within Psyr_4241 at 5053.876 kb on - strand, within Psyr_4241 at 5053.878 kb on - strand, within Psyr_4241 at 5054.007 kb on + strand, within Psyr_4241 at 5054.008 kb on - strand, within Psyr_4241 at 5054.241 kb on + strand, within Psyr_4241 at 5054.241 kb on + strand, within Psyr_4241 at 5054.241 kb on + strand, within Psyr_4241 at 5054.241 kb on + strand, within Psyr_4241 at 5054.241 kb on + strand, within Psyr_4241 at 5054.242 kb on - strand, within Psyr_4241 at 5054.242 kb on - strand, within Psyr_4241 at 5054.434 kb on - strand, within Psyr_4241 at 5054.438 kb on - strand at 5054.438 kb on - strand at 5054.438 kb on - strand at 5054.438 kb on - strand at 5054.505 kb on + strand at 5054.505 kb on + strand at 5054.505 kb on + strand at 5054.506 kb on - strand at 5054.506 kb on - strand at 5054.529 kb on + strand at 5054.529 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Anisodamine Hydrobromide () 10 mM remove 5,051,681 + +1.8 5,051,682 - -0.7 5,051,806 + Psyr_4239 0.18 +1.0 5,051,806 + Psyr_4239 0.18 +0.2 5,051,815 + Psyr_4239 0.19 -0.2 5,051,815 + Psyr_4239 0.19 -0.7 5,051,815 + Psyr_4239 0.19 -1.4 5,051,815 + Psyr_4239 0.19 -0.3 5,051,816 - Psyr_4239 0.19 -0.4 5,051,816 - Psyr_4239 0.19 -1.1 5,051,816 - Psyr_4239 0.19 -0.7 5,051,824 + Psyr_4239 0.20 -0.5 5,051,824 + Psyr_4239 0.20 +0.1 5,051,825 - Psyr_4239 0.20 -0.6 5,051,825 - Psyr_4239 0.20 +0.2 5,051,825 - Psyr_4239 0.20 +1.0 5,052,040 + Psyr_4239 0.42 -1.0 5,052,137 - Psyr_4239 0.51 -0.1 5,052,137 - Psyr_4239 0.51 -0.2 5,052,137 - Psyr_4239 0.51 -1.7 5,052,137 - Psyr_4239 0.51 +0.8 5,052,243 - Psyr_4239 0.62 +0.2 5,052,316 + Psyr_4239 0.69 +1.3 5,052,316 + Psyr_4239 0.69 +0.4 5,052,316 + Psyr_4239 0.69 -0.2 5,052,317 - Psyr_4239 0.69 -0.4 5,052,317 - Psyr_4239 0.69 -0.1 5,052,317 - Psyr_4239 0.69 +0.1 5,052,317 - Psyr_4239 0.69 +0.3 5,052,317 - Psyr_4239 0.69 -0.4 5,052,317 - Psyr_4239 0.69 +0.5 5,052,317 - Psyr_4239 0.69 +0.1 5,052,363 - Psyr_4239 0.73 -0.1 5,052,363 - Psyr_4239 0.73 -0.2 5,052,652 + +0.8 5,052,687 - -0.1 5,053,169 + Psyr_4240 0.58 +0.7 5,053,169 + Psyr_4240 0.58 -0.3 5,053,169 + Psyr_4240 0.58 +1.4 5,053,169 + Psyr_4240 0.58 -0.1 5,053,169 + Psyr_4240 0.58 -0.8 5,053,169 + Psyr_4240 0.58 +0.6 5,053,169 + Psyr_4240 0.58 +0.8 5,053,169 + Psyr_4240 0.58 +0.8 5,053,170 - Psyr_4240 0.58 -1.1 5,053,170 - Psyr_4240 0.58 +0.8 5,053,170 - Psyr_4240 0.58 -0.6 5,053,170 - Psyr_4240 0.58 +0.3 5,053,170 - Psyr_4240 0.58 +1.0 5,053,170 - Psyr_4240 0.58 +0.4 5,053,170 - Psyr_4240 0.58 +0.9 5,053,170 - Psyr_4240 0.58 +1.9 5,053,170 - Psyr_4240 0.58 +0.5 5,053,170 - Psyr_4240 0.58 +1.6 5,053,170 - Psyr_4240 0.58 +1.8 5,053,217 + Psyr_4240 0.63 +0.9 5,053,217 + Psyr_4240 0.63 +0.5 5,053,218 - Psyr_4240 0.63 +0.6 5,053,374 + Psyr_4240 0.80 +0.8 5,053,374 + Psyr_4240 0.80 +0.4 5,053,424 + Psyr_4240 0.86 -0.4 5,053,424 + Psyr_4240 0.86 -0.6 5,053,424 + Psyr_4240 0.86 +1.2 5,053,425 - Psyr_4240 0.86 +1.3 5,053,425 - Psyr_4240 0.86 +0.2 5,053,618 + +0.5 5,053,663 + Psyr_4241 0.10 +1.3 5,053,663 + Psyr_4241 0.10 -1.1 5,053,664 - Psyr_4241 0.10 +0.9 5,053,875 + Psyr_4241 0.32 +0.5 5,053,875 + Psyr_4241 0.32 +0.1 5,053,875 + Psyr_4241 0.32 -0.1 5,053,876 - Psyr_4241 0.32 +0.1 5,053,876 - Psyr_4241 0.32 -0.1 5,053,876 - Psyr_4241 0.32 +0.4 5,053,876 - Psyr_4241 0.32 -0.9 5,053,876 - Psyr_4241 0.32 -0.5 5,053,876 - Psyr_4241 0.32 +0.6 5,053,876 - Psyr_4241 0.32 -0.2 5,053,876 - Psyr_4241 0.32 +0.4 5,053,876 - Psyr_4241 0.32 +0.7 5,053,878 - Psyr_4241 0.33 -0.1 5,054,007 + Psyr_4241 0.46 -1.5 5,054,008 - Psyr_4241 0.46 +2.0 5,054,241 + Psyr_4241 0.70 -0.1 5,054,241 + Psyr_4241 0.70 -0.5 5,054,241 + Psyr_4241 0.70 +0.2 5,054,241 + Psyr_4241 0.70 -0.4 5,054,241 + Psyr_4241 0.70 +1.5 5,054,242 - Psyr_4241 0.70 -0.3 5,054,242 - Psyr_4241 0.70 -1.1 5,054,434 - Psyr_4241 0.90 -0.2 5,054,438 - +0.2 5,054,438 - -1.0 5,054,438 - -0.9 5,054,438 - +0.8 5,054,505 + +0.1 5,054,505 + +0.3 5,054,505 + -0.3 5,054,506 - +0.3 5,054,506 - +0.3 5,054,529 + +0.1 5,054,529 + -2.2
Or see this region's nucleotide sequence