Experiment: KB with Anisodamine Hydrobromide () 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2383 and Psyr_2384 are separated by 22 nucleotides Psyr_2384 and Psyr_2385 overlap by 4 nucleotides Psyr_2385 and Psyr_2386 are separated by 376 nucleotides Psyr_2386 and Psyr_2387 are separated by 156 nucleotides
Psyr_2383: Psyr_2383 - Protein of unknown function DUF72, at 2,761,819 to 2,762,553
_2383
Psyr_2384: Psyr_2384 - response regulator receiver protein, at 2,762,576 to 2,762,953
_2384
Psyr_2385: Psyr_2385 - Phytochrome:GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:HWE histidine kinase, at 2,762,950 to 2,765,961
_2385
Psyr_2386: Psyr_2386 - hypothetical protein, at 2,766,338 to 2,766,574
_2386
Psyr_2387: Psyr_2387 - Malate:quinone-oxidoreductase, at 2,766,731 to 2,768,386
_2387
Position (kb)
2762
2763
2764
2765
2766 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2761.975 kb on + strand, within Psyr_2383 at 2762.354 kb on - strand, within Psyr_2383 at 2762.396 kb on - strand, within Psyr_2383 at 2762.554 kb on + strand at 2762.554 kb on + strand at 2762.554 kb on + strand at 2762.554 kb on + strand at 2762.554 kb on + strand at 2762.555 kb on - strand at 2762.785 kb on - strand, within Psyr_2384 at 2762.953 kb on + strand at 2762.953 kb on + strand at 2762.954 kb on - strand at 2763.631 kb on + strand, within Psyr_2385 at 2763.632 kb on - strand, within Psyr_2385 at 2763.651 kb on + strand, within Psyr_2385 at 2763.691 kb on + strand, within Psyr_2385 at 2763.692 kb on - strand, within Psyr_2385 at 2763.763 kb on - strand, within Psyr_2385 at 2763.764 kb on + strand, within Psyr_2385 at 2763.764 kb on + strand, within Psyr_2385 at 2763.764 kb on + strand, within Psyr_2385 at 2763.765 kb on - strand, within Psyr_2385 at 2763.765 kb on - strand, within Psyr_2385 at 2763.765 kb on - strand, within Psyr_2385 at 2763.765 kb on - strand, within Psyr_2385 at 2763.765 kb on - strand, within Psyr_2385 at 2763.853 kb on + strand, within Psyr_2385 at 2763.854 kb on - strand, within Psyr_2385 at 2763.967 kb on + strand, within Psyr_2385 at 2763.968 kb on - strand, within Psyr_2385 at 2764.781 kb on + strand, within Psyr_2385 at 2764.782 kb on - strand, within Psyr_2385 at 2764.826 kb on + strand, within Psyr_2385 at 2764.826 kb on + strand, within Psyr_2385 at 2764.912 kb on + strand, within Psyr_2385 at 2764.992 kb on + strand, within Psyr_2385 at 2765.136 kb on + strand, within Psyr_2385 at 2765.136 kb on + strand, within Psyr_2385 at 2765.137 kb on - strand, within Psyr_2385 at 2765.137 kb on - strand, within Psyr_2385 at 2765.171 kb on + strand, within Psyr_2385 at 2765.255 kb on - strand, within Psyr_2385 at 2765.273 kb on + strand, within Psyr_2385 at 2765.273 kb on + strand, within Psyr_2385 at 2765.273 kb on + strand, within Psyr_2385 at 2765.273 kb on + strand, within Psyr_2385 at 2765.273 kb on + strand, within Psyr_2385 at 2765.274 kb on - strand, within Psyr_2385 at 2765.274 kb on - strand, within Psyr_2385 at 2765.274 kb on - strand, within Psyr_2385 at 2765.274 kb on - strand, within Psyr_2385 at 2765.274 kb on - strand, within Psyr_2385 at 2765.274 kb on - strand, within Psyr_2385 at 2765.274 kb on - strand, within Psyr_2385 at 2765.432 kb on + strand, within Psyr_2385 at 2765.628 kb on - strand, within Psyr_2385 at 2765.653 kb on + strand, within Psyr_2385 at 2765.905 kb on + strand at 2766.098 kb on + strand at 2766.157 kb on + strand at 2766.157 kb on + strand at 2766.158 kb on - strand at 2766.158 kb on - strand at 2766.180 kb on + strand at 2766.180 kb on + strand at 2766.180 kb on + strand at 2766.181 kb on - strand at 2766.213 kb on - strand at 2766.218 kb on + strand at 2766.219 kb on - strand at 2766.226 kb on + strand at 2766.533 kb on + strand, within Psyr_2386 at 2766.533 kb on + strand, within Psyr_2386 at 2766.534 kb on - strand, within Psyr_2386 at 2766.534 kb on - strand, within Psyr_2386 at 2766.562 kb on + strand at 2766.563 kb on - strand at 2766.733 kb on - strand at 2766.800 kb on - strand at 2766.800 kb on - strand at 2766.852 kb on + strand at 2766.853 kb on - strand at 2766.853 kb on - strand at 2766.853 kb on - strand at 2766.853 kb on - strand at 2766.907 kb on + strand, within Psyr_2387 at 2766.907 kb on + strand, within Psyr_2387 at 2766.951 kb on - strand, within Psyr_2387
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Anisodamine Hydrobromide () 10 mM remove 2,761,975 + Psyr_2383 0.21 -0.4 2,762,354 - Psyr_2383 0.73 -0.1 2,762,396 - Psyr_2383 0.79 +0.6 2,762,554 + -1.2 2,762,554 + -0.4 2,762,554 + +0.3 2,762,554 + -0.7 2,762,554 + +0.7 2,762,555 - +0.6 2,762,785 - Psyr_2384 0.55 +0.6 2,762,953 + +0.7 2,762,953 + +0.3 2,762,954 - -0.5 2,763,631 + Psyr_2385 0.23 -0.2 2,763,632 - Psyr_2385 0.23 -1.0 2,763,651 + Psyr_2385 0.23 -0.7 2,763,691 + Psyr_2385 0.25 +1.6 2,763,692 - Psyr_2385 0.25 -1.7 2,763,763 - Psyr_2385 0.27 +0.4 2,763,764 + Psyr_2385 0.27 +0.1 2,763,764 + Psyr_2385 0.27 -0.4 2,763,764 + Psyr_2385 0.27 +1.4 2,763,765 - Psyr_2385 0.27 -0.6 2,763,765 - Psyr_2385 0.27 -1.0 2,763,765 - Psyr_2385 0.27 +0.2 2,763,765 - Psyr_2385 0.27 +1.6 2,763,765 - Psyr_2385 0.27 +0.6 2,763,853 + Psyr_2385 0.30 -0.6 2,763,854 - Psyr_2385 0.30 +0.0 2,763,967 + Psyr_2385 0.34 -1.0 2,763,968 - Psyr_2385 0.34 +0.6 2,764,781 + Psyr_2385 0.61 +0.8 2,764,782 - Psyr_2385 0.61 +1.6 2,764,826 + Psyr_2385 0.62 +0.0 2,764,826 + Psyr_2385 0.62 -1.7 2,764,912 + Psyr_2385 0.65 +0.2 2,764,992 + Psyr_2385 0.68 +0.4 2,765,136 + Psyr_2385 0.73 -0.5 2,765,136 + Psyr_2385 0.73 -0.1 2,765,137 - Psyr_2385 0.73 -0.1 2,765,137 - Psyr_2385 0.73 -0.4 2,765,171 + Psyr_2385 0.74 +0.1 2,765,255 - Psyr_2385 0.77 -1.0 2,765,273 + Psyr_2385 0.77 -0.6 2,765,273 + Psyr_2385 0.77 -0.2 2,765,273 + Psyr_2385 0.77 -1.3 2,765,273 + Psyr_2385 0.77 -0.3 2,765,273 + Psyr_2385 0.77 -0.8 2,765,274 - Psyr_2385 0.77 -0.4 2,765,274 - Psyr_2385 0.77 +1.6 2,765,274 - Psyr_2385 0.77 +0.7 2,765,274 - Psyr_2385 0.77 -1.0 2,765,274 - Psyr_2385 0.77 +1.1 2,765,274 - Psyr_2385 0.77 +0.6 2,765,274 - Psyr_2385 0.77 +1.4 2,765,432 + Psyr_2385 0.82 +0.5 2,765,628 - Psyr_2385 0.89 +2.4 2,765,653 + Psyr_2385 0.90 +0.5 2,765,905 + +1.6 2,766,098 + +0.6 2,766,157 + +0.2 2,766,157 + -0.2 2,766,158 - -1.2 2,766,158 - +0.0 2,766,180 + +0.2 2,766,180 + +0.9 2,766,180 + +1.0 2,766,181 - -1.2 2,766,213 - -1.0 2,766,218 + -2.8 2,766,219 - +0.0 2,766,226 + +0.8 2,766,533 + Psyr_2386 0.82 -0.3 2,766,533 + Psyr_2386 0.82 -0.8 2,766,534 - Psyr_2386 0.83 +0.8 2,766,534 - Psyr_2386 0.83 +1.9 2,766,562 + -1.2 2,766,563 - -0.4 2,766,733 - +0.3 2,766,800 - -0.5 2,766,800 - +0.7 2,766,852 + -1.2 2,766,853 - +0.0 2,766,853 - +0.6 2,766,853 - +1.3 2,766,853 - +1.8 2,766,907 + Psyr_2387 0.11 -1.7 2,766,907 + Psyr_2387 0.11 -0.2 2,766,951 - Psyr_2387 0.13 +1.3
Or see this region's nucleotide sequence