Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4222

Experiment: Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.2 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.2 vol%
5,557,984	-				-1.0
5,558,045	+				+1.6
5,558,046	-				-0.6
5,558,052	-				-0.0
5,558,101	-				-2.3
5,558,103	+				-1.4
5,558,104	-				-0.5
5,558,119	-				-0.8
5,558,157	+				+0.4
5,558,157	+				+0.4
5,558,158	-				-0.0
5,558,168	+				-1.1
5,558,279	+		BT4221	0.25	-0.0
5,558,284	+		BT4221	0.26	-0.9
5,558,286	+		BT4221	0.26	-0.6
5,558,294	-		BT4221	0.28	-0.0
5,558,311	-		BT4221	0.31	-1.6
5,558,472	+		BT4221	0.63	+1.0
5,558,472	+		BT4221	0.63	-1.6
5,558,473	-		BT4221	0.64	-0.6
5,558,476	+		BT4221	0.64	-1.6
5,558,477	-		BT4221	0.64	-1.4
5,558,477	-		BT4221	0.64	-0.0
5,558,477	-		BT4221	0.64	-1.6
5,558,477	-		BT4221	0.64	-0.0
5,558,478	+		BT4221	0.65	-1.6
5,558,479	-		BT4221	0.65	-2.7
5,558,526	-		BT4221	0.74	+1.6
5,558,527	-		BT4221	0.74	-0.6
5,558,537	-		BT4221	0.77	+0.2
5,558,564	+		BT4221	0.82	-0.0
5,558,564	+		BT4221	0.82	-2.1
5,558,564	+		BT4221	0.82	-0.7
5,558,565	-		BT4221	0.82	-2.3
5,558,565	-		BT4221	0.82	-0.0
5,558,565	-		BT4221	0.82	-1.4
5,558,585	+		BT4221	0.86	-0.0
5,558,588	+		BT4221	0.87	-2.6
5,558,614	+				+1.3
5,558,644	+				-0.2
5,558,654	-				-0.6
5,558,654	-				-1.0
5,558,670	+				+1.8
5,558,670	+				-0.6
5,558,673	-				-0.0
5,558,687	+				+1.6
5,558,729	-				-0.6
5,558,747	+				-1.0
5,558,800	-				+0.6
5,558,800	-				-1.6
5,558,808	-				-0.4
5,558,813	+				-2.0
5,558,857	-				-3.0
5,558,859	-				-1.3
5,558,859	-				-0.0
5,558,859	-				-1.6
5,558,876	-				-1.8
5,558,892	-				-0.0
5,558,892	-				-1.8
5,558,892	-				-0.6
5,558,914	+				-0.9
5,558,935	+				-0.8
5,558,935	+				-1.3
5,559,023	+				-0.8
5,559,023	+				-0.0
5,559,023	+				-1.1
5,559,024	-				-2.8
5,559,024	-				-2.0
5,559,024	-				+1.0
5,559,136	+		BT4222	0.15	-1.0
5,559,136	+		BT4222	0.15	+1.0
5,559,137	-		BT4222	0.15	-1.0
5,559,146	+		BT4222	0.16	-2.3
5,559,167	+		BT4222	0.18	-0.9
5,559,353	-		BT4222	0.35	-1.4
5,559,355	-		BT4222	0.35	-1.2
5,559,359	-		BT4222	0.36	-0.0
5,559,384	+		BT4222	0.38	-1.0
5,559,385	-		BT4222	0.38	+1.0
5,559,433	+		BT4222	0.43	-0.0
5,559,441	+		BT4222	0.43	-1.6
5,559,441	+		BT4222	0.43	-1.6
5,559,442	-		BT4222	0.43	-1.3
5,559,442	-		BT4222	0.43	-2.0
5,559,472	+		BT4222	0.46	-2.4
5,559,473	-		BT4222	0.46	+1.0
5,559,495	-		BT4222	0.48	-0.6
5,559,503	+		BT4222	0.49	-0.2
5,559,592	-		BT4222	0.57	-0.5
5,559,592	-		BT4222	0.57	-0.0
5,559,628	-		BT4222	0.61	-0.4
5,559,704	+		BT4222	0.68	+0.5
5,559,705	-		BT4222	0.68	-0.4
5,559,740	+		BT4222	0.71	+1.3
5,559,853	+		BT4222	0.82	+1.0
5,559,855	+		BT4222	0.82	+2.0
5,559,858	+		BT4222	0.82	-1.5
5,559,862	+		BT4222	0.83	+1.3
5,559,863	-		BT4222	0.83	-2.0
5,559,934	-		BT4222	0.89	-0.2
5,559,990	+				-0.6
5,560,025	+				-0.2
5,560,025	+				+0.7
5,560,026	-				-0.2
5,560,030	-				-0.0
5,560,054	-				-0.0
5,560,068	-				-0.6
5,560,071	+				+2.6
5,560,072	-				-0.0
5,560,089	-				-0.0
5,560,089	-				-2.3
5,560,093	-				-1.7
5,560,135	+				-0.8
5,560,136	-				-1.6
5,560,182	+				-0.0
5,560,184	+				-1.3
5,560,363	+				-0.8
5,560,600	+		BT4223	0.51	-1.0
5,560,609	+		BT4223	0.53	-0.0
5,560,621	-		BT4223	0.56	-0.0
5,560,639	-		BT4223	0.60	+0.6
5,560,656	+		BT4223	0.64	-1.0
5,560,723	+		BT4223	0.78	-0.8
5,560,745	+		BT4223	0.83	-0.7
5,560,831	-				-2.3
5,560,836	+				-0.0
5,560,836	+				+1.0
5,560,863	+				+1.6
5,561,000	+				+2.0
5,561,010	-				-0.6