Experiment: minimal media, aerobic, 0G configuration
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO4277 and SO4278 are separated by 59 nucleotides SO4278 and SO4279 are separated by 253 nucleotides
SO4277: SO4277 - ISSod1, transposase OrfB (NCBI ptt file), at 4,455,979 to 4,456,788
SO4277
SO4278: SO4278 - ISSod1, transposase OrfA (NCBI ptt file), at 4,456,848 to 4,457,138
SO4278
SO4279: SO4279 - membrane protein, putative (NCBI ptt file), at 4,457,392 to 4,458,369
SO4279
Position (kb)
4456
4457
4458 Strain fitness (log2 ratio)
-2
-1
0
1 at 4455.849 kb on + strand at 4455.872 kb on - strand at 4455.927 kb on + strand at 4455.933 kb on - strand at 4455.936 kb on - strand at 4455.958 kb on + strand at 4455.958 kb on + strand at 4455.958 kb on + strand at 4455.958 kb on + strand at 4455.958 kb on + strand at 4455.958 kb on + strand at 4455.958 kb on + strand at 4455.958 kb on + strand at 4455.958 kb on + strand at 4455.966 kb on - strand at 4455.966 kb on - strand at 4455.966 kb on - strand at 4455.966 kb on - strand at 4455.966 kb on - strand at 4455.966 kb on - strand at 4455.980 kb on - strand at 4455.980 kb on - strand at 4455.990 kb on - strand at 4457.167 kb on + strand at 4457.190 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.191 kb on + strand at 4457.196 kb on + strand at 4457.201 kb on + strand at 4457.201 kb on + strand at 4457.223 kb on - strand at 4457.225 kb on - strand at 4457.260 kb on - strand at 4457.271 kb on + strand at 4457.279 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction minimal media, aerobic, 0G configuration remove 4,455,849 + -0.3 4,455,872 - +0.9 4,455,927 + -1.1 4,455,933 - +0.5 4,455,936 - -1.1 4,455,958 + +0.1 4,455,958 + -0.7 4,455,958 + +0.4 4,455,958 + -0.4 4,455,958 + +0.2 4,455,958 + -0.6 4,455,958 + -0.5 4,455,958 + -1.4 4,455,958 + -0.2 4,455,966 - -1.5 4,455,966 - +0.1 4,455,966 - +0.2 4,455,966 - +1.1 4,455,966 - -1.6 4,455,966 - -0.3 4,455,980 - +0.0 4,455,980 - -0.0 4,455,990 - -0.8 4,457,167 + -0.2 4,457,190 + +0.1 4,457,191 + +0.1 4,457,191 + -0.2 4,457,191 + +0.3 4,457,191 + +0.3 4,457,191 + -1.2 4,457,191 + -0.1 4,457,191 + -0.1 4,457,191 + -0.7 4,457,191 + +0.1 4,457,191 + +0.1 4,457,191 + +0.5 4,457,191 + +0.5 4,457,191 + +0.6 4,457,191 + -0.0 4,457,191 + -0.3 4,457,191 + -0.1 4,457,191 + +0.5 4,457,191 + -0.2 4,457,191 + +0.4 4,457,191 + -0.5 4,457,191 + -2.1 4,457,191 + +0.1 4,457,196 + -0.2 4,457,201 + +0.1 4,457,201 + +1.1 4,457,223 - +0.5 4,457,225 - -0.7 4,457,260 - -0.3 4,457,271 + -0.6 4,457,279 - -2.0
Or see this region's nucleotide sequence