Experiment: minimal media, aerobic, 0G configuration
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO2690 and SO2691 overlap by 4 nucleotides SO2691 and SO2692 are separated by 16 nucleotides SO2692 and SO2693 are separated by 2 nucleotides
SO2690: SO2690 - prophage MuSo2, virion morphogenesis protein, putative (NCBI ptt file), at 2,810,636 to 2,811,133
SO2690
SO2691: SO2691 - hypothetical protein (NCBI ptt file), at 2,811,130 to 2,811,720
SO2691
SO2692: SO2692 - conserved hypothetical protein (NCBI ptt file), at 2,811,737 to 2,811,901
SO2692
SO2693: SO2693 - prophage MuSo2, tail sheath protein, putative (NCBI ptt file), at 2,811,904 to 2,813,385
SO2693
Position (kb)
2811
2812 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2810.767 kb on + strand, within SO2690 at 2810.784 kb on + strand, within SO2690 at 2810.817 kb on - strand, within SO2690 at 2810.840 kb on + strand, within SO2690 at 2810.887 kb on + strand, within SO2690 at 2810.887 kb on + strand, within SO2690 at 2810.895 kb on - strand, within SO2690 at 2810.895 kb on - strand, within SO2690 at 2810.957 kb on + strand, within SO2690 at 2810.975 kb on + strand, within SO2690 at 2810.975 kb on + strand, within SO2690 at 2810.983 kb on - strand, within SO2690 at 2810.983 kb on - strand, within SO2690 at 2811.086 kb on + strand at 2811.105 kb on - strand at 2811.132 kb on + strand at 2811.152 kb on + strand at 2811.172 kb on - strand at 2811.214 kb on + strand, within SO2691 at 2811.356 kb on - strand, within SO2691 at 2811.480 kb on + strand, within SO2691 at 2811.502 kb on + strand, within SO2691 at 2811.632 kb on + strand, within SO2691 at 2811.671 kb on - strand at 2811.849 kb on + strand, within SO2692 at 2811.978 kb on + strand at 2811.989 kb on - strand at 2812.055 kb on + strand, within SO2693 at 2812.062 kb on - strand, within SO2693 at 2812.063 kb on - strand, within SO2693 at 2812.127 kb on + strand, within SO2693 at 2812.127 kb on + strand, within SO2693 at 2812.127 kb on + strand, within SO2693 at 2812.127 kb on + strand, within SO2693 at 2812.135 kb on - strand, within SO2693 at 2812.135 kb on - strand, within SO2693 at 2812.135 kb on - strand, within SO2693 at 2812.206 kb on + strand, within SO2693 at 2812.282 kb on + strand, within SO2693 at 2812.290 kb on - strand, within SO2693 at 2812.291 kb on + strand, within SO2693 at 2812.381 kb on - strand, within SO2693 at 2812.394 kb on + strand, within SO2693 at 2812.499 kb on + strand, within SO2693 at 2812.649 kb on + strand, within SO2693 at 2812.682 kb on - strand, within SO2693 at 2812.698 kb on - strand, within SO2693 at 2812.813 kb on + strand, within SO2693 at 2812.821 kb on - strand, within SO2693 at 2812.874 kb on - strand, within SO2693
Per-strain Table
Position Strand Gene LocusTag Fraction minimal media, aerobic, 0G configuration remove 2,810,767 + SO2690 0.26 +1.1 2,810,784 + SO2690 0.30 +0.3 2,810,817 - SO2690 0.36 +1.4 2,810,840 + SO2690 0.41 -1.8 2,810,887 + SO2690 0.50 -0.2 2,810,887 + SO2690 0.50 -0.6 2,810,895 - SO2690 0.52 +0.2 2,810,895 - SO2690 0.52 +0.4 2,810,957 + SO2690 0.64 +0.2 2,810,975 + SO2690 0.68 -0.5 2,810,975 + SO2690 0.68 +0.2 2,810,983 - SO2690 0.70 +0.2 2,810,983 - SO2690 0.70 -0.1 2,811,086 + +0.6 2,811,105 - -0.8 2,811,132 + -0.7 2,811,152 + +0.8 2,811,172 - -1.8 2,811,214 + SO2691 0.14 -0.6 2,811,356 - SO2691 0.38 +0.1 2,811,480 + SO2691 0.59 -0.2 2,811,502 + SO2691 0.63 +0.8 2,811,632 + SO2691 0.85 +0.1 2,811,671 - -0.5 2,811,849 + SO2692 0.68 -0.7 2,811,978 + -0.5 2,811,989 - -2.2 2,812,055 + SO2693 0.10 +2.4 2,812,062 - SO2693 0.11 +0.2 2,812,063 - SO2693 0.11 -0.6 2,812,127 + SO2693 0.15 -0.1 2,812,127 + SO2693 0.15 -0.3 2,812,127 + SO2693 0.15 +0.4 2,812,127 + SO2693 0.15 -0.3 2,812,135 - SO2693 0.16 +1.4 2,812,135 - SO2693 0.16 -0.2 2,812,135 - SO2693 0.16 +0.3 2,812,206 + SO2693 0.20 -1.8 2,812,282 + SO2693 0.26 -0.1 2,812,290 - SO2693 0.26 +0.1 2,812,291 + SO2693 0.26 +0.3 2,812,381 - SO2693 0.32 -1.1 2,812,394 + SO2693 0.33 +0.3 2,812,499 + SO2693 0.40 -0.4 2,812,649 + SO2693 0.50 -1.5 2,812,682 - SO2693 0.52 +0.1 2,812,698 - SO2693 0.54 -0.2 2,812,813 + SO2693 0.61 +0.3 2,812,821 - SO2693 0.62 -0.5 2,812,874 - SO2693 0.65 -0.1
Or see this region's nucleotide sequence