Strain Fitness in Shewanella oneidensis MR-1 around SO1637

Experiment: minimal media, aerobic, 0G configuration

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

No fitness data for strains within 1,717,937 to 1,722,417
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500 ntSO1636 and SO1637 are separated by 31 nucleotidesSO1637 and ompH are separated by 56 nucleotidesompH and lpxD are separated by 3 nucleotides SO1636: SO1636 - membrane-associated zinc metalloprotease, putative (NCBI ptt file), at 1,717,535 to 1,718,905 SO1636 SO1637: SO1637 - bacterial surface antigen (NCBI ptt file), at 1,718,937 to 1,721,417 SO1637 SO1638: ompH - outer membrane protein OmpH (NCBI ptt file), at 1,721,474 to 1,721,980 ompH SO1639: lpxD - UDP-3-O-(3-hydroxymyristoyl) glucosamine n-acyltransferase (NCBI ptt file), at 1,721,984 to 1,723,009 lpxD