Experiment: minimal media, aerobic, 0G configuration
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0890 and SO0891 are separated by 154 nucleotides SO0891 and SO0892 are separated by 59 nucleotides SO0892 and SO_0893 overlap by 65 nucleotides
SO0890: SO0890 - hypothetical protein (NCBI ptt file), at 919,310 to 920,074
SO0890
SO0891: SO0891 - ISSod1, transposase OrfA (NCBI ptt file), at 920,229 to 920,519
SO0891
SO0892: SO0892 - ISSod1, transposase OrfB (NCBI ptt file), at 920,579 to 921,388
SO0892
SO_0893: SO_0893 - no description, at 921,324 to 922,547
_0893
Position (kb) 920
921
922 Strain fitness (log2 ratio) -2
-1
0
1
2 at 919.586 kb on - strand, within SO0890 at 919.593 kb on - strand, within SO0890 at 919.610 kb on + strand, within SO0890 at 919.656 kb on + strand, within SO0890 at 919.666 kb on + strand, within SO0890 at 919.674 kb on - strand, within SO0890 at 919.687 kb on + strand, within SO0890 at 919.687 kb on + strand, within SO0890 at 919.687 kb on + strand, within SO0890 at 919.687 kb on + strand, within SO0890 at 919.695 kb on - strand, within SO0890 at 919.726 kb on + strand, within SO0890 at 919.754 kb on + strand, within SO0890 at 919.754 kb on + strand, within SO0890 at 919.754 kb on + strand, within SO0890 at 919.762 kb on - strand, within SO0890 at 919.762 kb on - strand, within SO0890 at 919.762 kb on - strand, within SO0890 at 919.832 kb on - strand, within SO0890 at 919.854 kb on - strand, within SO0890 at 919.857 kb on + strand, within SO0890 at 919.881 kb on + strand, within SO0890 at 919.892 kb on + strand, within SO0890 at 919.905 kb on + strand, within SO0890 at 919.917 kb on + strand, within SO0890 at 919.924 kb on - strand, within SO0890 at 919.925 kb on - strand, within SO0890 at 919.933 kb on + strand, within SO0890 at 919.951 kb on + strand, within SO0890 at 919.961 kb on + strand, within SO0890 at 919.961 kb on + strand, within SO0890 at 919.961 kb on + strand, within SO0890 at 919.961 kb on + strand, within SO0890 at 919.961 kb on + strand, within SO0890 at 919.969 kb on - strand, within SO0890 at 919.969 kb on - strand, within SO0890 at 919.975 kb on + strand, within SO0890 at 919.975 kb on + strand, within SO0890 at 919.975 kb on + strand, within SO0890 at 919.996 kb on + strand, within SO0890 at 919.999 kb on + strand at 919.999 kb on + strand at 920.014 kb on + strand at 920.017 kb on - strand at 920.024 kb on + strand at 920.034 kb on + strand at 920.042 kb on - strand at 920.125 kb on + strand at 920.176 kb on - strand at 920.176 kb on - strand at 920.176 kb on - strand at 920.176 kb on - strand at 920.176 kb on - strand at 920.176 kb on - strand at 920.176 kb on - strand at 920.176 kb on - strand at 920.176 kb on - strand at 920.176 kb on - strand at 920.176 kb on - strand at 920.176 kb on - strand at 920.176 kb on - strand at 920.176 kb on - strand at 920.176 kb on - strand at 920.176 kb on - strand at 920.176 kb on - strand at 920.177 kb on - strand at 920.177 kb on - strand at 920.177 kb on - strand at 921.382 kb on + strand at 921.387 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction minimal media, aerobic, 0G configuration remove 919,586 - SO0890 0.36 +1.0 919,593 - SO0890 0.37 -0.3 919,610 + SO0890 0.39 +1.0 919,656 + SO0890 0.45 -0.2 919,666 + SO0890 0.47 -0.3 919,674 - SO0890 0.48 -0.0 919,687 + SO0890 0.49 -0.0 919,687 + SO0890 0.49 -0.0 919,687 + SO0890 0.49 -0.6 919,687 + SO0890 0.49 -0.5 919,695 - SO0890 0.50 +0.8 919,726 + SO0890 0.54 +1.0 919,754 + SO0890 0.58 +0.7 919,754 + SO0890 0.58 +0.4 919,754 + SO0890 0.58 -0.3 919,762 - SO0890 0.59 +2.5 919,762 - SO0890 0.59 +0.4 919,762 - SO0890 0.59 -0.3 919,832 - SO0890 0.68 +0.5 919,854 - SO0890 0.71 +0.1 919,857 + SO0890 0.72 -0.0 919,881 + SO0890 0.75 +0.5 919,892 + SO0890 0.76 +0.5 919,905 + SO0890 0.78 -2.0 919,917 + SO0890 0.79 -0.0 919,924 - SO0890 0.80 +0.1 919,925 - SO0890 0.80 -0.0 919,933 + SO0890 0.81 +0.2 919,951 + SO0890 0.84 -0.4 919,961 + SO0890 0.85 -1.0 919,961 + SO0890 0.85 -0.3 919,961 + SO0890 0.85 -0.1 919,961 + SO0890 0.85 -0.3 919,961 + SO0890 0.85 -0.9 919,969 - SO0890 0.86 -0.5 919,969 - SO0890 0.86 -0.0 919,975 + SO0890 0.87 -0.3 919,975 + SO0890 0.87 -0.4 919,975 + SO0890 0.87 -0.7 919,996 + SO0890 0.90 +0.1 919,999 + -0.4 919,999 + -0.4 920,014 + -0.7 920,017 - -0.1 920,024 + -0.4 920,034 + +0.4 920,042 - +0.1 920,125 + -0.0 920,176 - -0.4 920,176 - +0.6 920,176 - +0.6 920,176 - +0.3 920,176 - -0.4 920,176 - -0.2 920,176 - +0.2 920,176 - +0.5 920,176 - -0.0 920,176 - +0.2 920,176 - +0.3 920,176 - +0.1 920,176 - +0.3 920,176 - +0.5 920,176 - -0.4 920,176 - +2.0 920,176 - +0.2 920,177 - -1.6 920,177 - -0.3 920,177 - -0.0 921,382 + +0.1 921,387 + +0.4
Or see this region's nucleotide sequence