Experiment: minimal media, aerobic, 0G configuration
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0841 and fusA-2 are separated by 438 nucleotides fusA-2 and SO0843 are separated by 213 nucleotides
SO0841: SO0841 - GGDEF domain protein (NCBI ptt file), at 861,295 to 862,764
SO0841
SO0842: fusA-2 - translation elongation factor G (NCBI ptt file), at 863,203 to 865,296
fusA-2
SO0843: SO0843 - transcriptional regulator, LysR family (NCBI ptt file), at 865,510 to 866,391
SO0843
Position (kb) 863
864
865
866 Strain fitness (log2 ratio) -1
0
1 at 862.221 kb on + strand, within SO0841 at 862.221 kb on + strand, within SO0841 at 862.221 kb on + strand, within SO0841 at 862.259 kb on - strand, within SO0841 at 862.280 kb on + strand, within SO0841 at 862.280 kb on + strand, within SO0841 at 862.288 kb on - strand, within SO0841 at 862.346 kb on + strand, within SO0841 at 862.366 kb on + strand, within SO0841 at 862.410 kb on + strand, within SO0841 at 862.417 kb on - strand, within SO0841 at 862.429 kb on - strand, within SO0841 at 862.429 kb on - strand, within SO0841 at 862.429 kb on - strand, within SO0841 at 862.460 kb on + strand, within SO0841 at 862.461 kb on + strand, within SO0841 at 862.469 kb on - strand, within SO0841 at 862.469 kb on - strand, within SO0841 at 862.561 kb on + strand, within SO0841 at 862.569 kb on - strand, within SO0841 at 862.637 kb on + strand at 862.667 kb on + strand at 862.675 kb on - strand at 862.685 kb on - strand at 862.881 kb on - strand at 862.907 kb on + strand at 862.917 kb on + strand at 862.925 kb on - strand at 865.269 kb on + strand at 865.277 kb on - strand at 865.277 kb on - strand at 865.443 kb on + strand at 865.561 kb on + strand at 865.574 kb on + strand at 865.616 kb on + strand, within SO0843 at 865.624 kb on - strand, within SO0843 at 865.714 kb on + strand, within SO0843 at 865.749 kb on + strand, within SO0843 at 865.803 kb on - strand, within SO0843 at 865.854 kb on - strand, within SO0843 at 865.937 kb on + strand, within SO0843 at 865.937 kb on + strand, within SO0843 at 865.937 kb on + strand, within SO0843 at 865.937 kb on + strand, within SO0843 at 865.937 kb on + strand, within SO0843 at 865.945 kb on - strand, within SO0843 at 865.945 kb on - strand, within SO0843 at 865.945 kb on - strand, within SO0843 at 866.036 kb on + strand, within SO0843 at 866.080 kb on + strand, within SO0843 at 866.103 kb on + strand, within SO0843 at 866.111 kb on - strand, within SO0843
Per-strain Table
Position Strand Gene LocusTag Fraction minimal media, aerobic, 0G configuration remove 862,221 + SO0841 0.63 +0.5 862,221 + SO0841 0.63 +0.2 862,221 + SO0841 0.63 -0.2 862,259 - SO0841 0.66 -0.1 862,280 + SO0841 0.67 -0.1 862,280 + SO0841 0.67 -0.8 862,288 - SO0841 0.68 -0.1 862,346 + SO0841 0.71 +0.3 862,366 + SO0841 0.73 +0.4 862,410 + SO0841 0.76 +0.4 862,417 - SO0841 0.76 -0.1 862,429 - SO0841 0.77 +1.4 862,429 - SO0841 0.77 -0.0 862,429 - SO0841 0.77 -1.4 862,460 + SO0841 0.79 +0.5 862,461 + SO0841 0.79 -1.2 862,469 - SO0841 0.80 +0.2 862,469 - SO0841 0.80 -1.5 862,561 + SO0841 0.86 +0.3 862,569 - SO0841 0.87 -0.5 862,637 + -1.4 862,667 + -0.1 862,675 - -0.1 862,685 - +0.6 862,881 - +0.8 862,907 + +0.0 862,917 + -0.0 862,925 - +0.6 865,269 + +0.4 865,277 - -1.0 865,277 - +1.0 865,443 + +0.8 865,561 + +0.5 865,574 + -0.8 865,616 + SO0843 0.12 -0.2 865,624 - SO0843 0.13 -0.4 865,714 + SO0843 0.23 +0.5 865,749 + SO0843 0.27 +1.6 865,803 - SO0843 0.33 +0.2 865,854 - SO0843 0.39 -0.8 865,937 + SO0843 0.48 -0.6 865,937 + SO0843 0.48 -0.9 865,937 + SO0843 0.48 -0.6 865,937 + SO0843 0.48 +0.7 865,937 + SO0843 0.48 -0.4 865,945 - SO0843 0.49 +1.1 865,945 - SO0843 0.49 +0.6 865,945 - SO0843 0.49 +0.4 866,036 + SO0843 0.60 +0.3 866,080 + SO0843 0.65 +0.2 866,103 + SO0843 0.67 -0.9 866,111 - SO0843 0.68 -0.4
Or see this region's nucleotide sequence