Experiment: minimal media, aerobic, 0G configuration
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0839 and SO0840 are separated by 122 nucleotides SO0840 and SO0841 are separated by 166 nucleotides
SO0839: SO0839 - transcriptional regulator, LysR family (NCBI ptt file), at 855,541 to 856,452
SO0839
SO0840: SO0840 - acetyl-CoA carboxylase multifunctional enzyme accADC, carboxyl transferase subunit alpha/carboxyl transferase subunit beta/biotin carboxylase (NCBI ptt file), at 856,575 to 861,128
SO0840
SO0841: SO0841 - GGDEF domain protein (NCBI ptt file), at 861,295 to 862,764
SO0841
Position (kb) 856
857
858
859
860
861
862 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 855.583 kb on - strand at 856.281 kb on + strand, within SO0839 at 861.194 kb on + strand at 861.317 kb on - strand at 861.355 kb on + strand at 861.368 kb on + strand at 861.390 kb on - strand at 861.470 kb on - strand, within SO0841 at 861.501 kb on - strand, within SO0841 at 861.524 kb on - strand, within SO0841 at 861.611 kb on + strand, within SO0841 at 861.752 kb on + strand, within SO0841 at 861.752 kb on + strand, within SO0841 at 861.760 kb on - strand, within SO0841 at 861.762 kb on + strand, within SO0841 at 861.770 kb on - strand, within SO0841 at 861.770 kb on - strand, within SO0841 at 861.770 kb on - strand, within SO0841 at 861.770 kb on - strand, within SO0841 at 861.770 kb on - strand, within SO0841 at 861.844 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.846 kb on + strand, within SO0841 at 861.853 kb on - strand, within SO0841 at 861.853 kb on - strand, within SO0841 at 861.854 kb on - strand, within SO0841 at 861.854 kb on - strand, within SO0841 at 861.854 kb on - strand, within SO0841 at 861.854 kb on - strand, within SO0841 at 861.854 kb on - strand, within SO0841 at 861.854 kb on - strand, within SO0841 at 861.854 kb on - strand, within SO0841 at 861.854 kb on - strand, within SO0841 at 861.854 kb on - strand, within SO0841 at 861.864 kb on - strand, within SO0841 at 861.874 kb on + strand, within SO0841 at 861.925 kb on + strand, within SO0841 at 861.933 kb on - strand, within SO0841 at 861.933 kb on - strand, within SO0841 at 862.054 kb on - strand, within SO0841 at 862.109 kb on - strand, within SO0841 at 862.126 kb on + strand, within SO0841
Per-strain Table
Position Strand Gene LocusTag Fraction minimal media, aerobic, 0G configuration remove 855,583 - -0.0 856,281 + SO0839 0.81 +1.0 861,194 + -0.9 861,317 - -1.4 861,355 + -0.6 861,368 + +0.8 861,390 - +0.0 861,470 - SO0841 0.12 -0.6 861,501 - SO0841 0.14 +0.0 861,524 - SO0841 0.16 +0.2 861,611 + SO0841 0.21 +0.2 861,752 + SO0841 0.31 -0.3 861,752 + SO0841 0.31 +1.2 861,760 - SO0841 0.32 +0.1 861,762 + SO0841 0.32 -0.4 861,770 - SO0841 0.32 -1.3 861,770 - SO0841 0.32 -0.0 861,770 - SO0841 0.32 -0.8 861,770 - SO0841 0.32 -0.9 861,770 - SO0841 0.32 +1.0 861,844 + SO0841 0.37 -0.1 861,846 + SO0841 0.37 +0.1 861,846 + SO0841 0.37 +0.4 861,846 + SO0841 0.37 +1.1 861,846 + SO0841 0.37 +1.0 861,846 + SO0841 0.37 +0.0 861,846 + SO0841 0.37 -0.2 861,846 + SO0841 0.37 -0.4 861,846 + SO0841 0.37 -1.8 861,846 + SO0841 0.37 -0.2 861,846 + SO0841 0.37 +0.2 861,846 + SO0841 0.37 +0.4 861,846 + SO0841 0.37 -1.5 861,853 - SO0841 0.38 -1.0 861,853 - SO0841 0.38 -0.2 861,854 - SO0841 0.38 +0.0 861,854 - SO0841 0.38 +3.0 861,854 - SO0841 0.38 -0.1 861,854 - SO0841 0.38 -0.2 861,854 - SO0841 0.38 +0.8 861,854 - SO0841 0.38 +0.2 861,854 - SO0841 0.38 +0.7 861,854 - SO0841 0.38 +0.2 861,854 - SO0841 0.38 -0.6 861,864 - SO0841 0.39 -0.0 861,874 + SO0841 0.39 -1.0 861,925 + SO0841 0.43 -0.1 861,933 - SO0841 0.43 +0.6 861,933 - SO0841 0.43 -0.8 862,054 - SO0841 0.52 -0.4 862,109 - SO0841 0.55 +0.5 862,126 + SO0841 0.57 -0.8
Or see this region's nucleotide sequence