Experiment: minimal media, aerobic, 0G configuration
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0772 and SO0773 are separated by 212 nucleotides SO0773 and SO0774 are separated by 55 nucleotides
SO0772: SO0772 - oxidoreductase, short chain dehydrogenase/reductase family (NCBI ptt file), at 785,081 to 785,800
SO0772
SO0773: SO0773 - ISSod6, transposase (NCBI ptt file), at 786,013 to 786,771
SO0773
SO0774: SO0774 - 5-formyltetrahydrofolate cyclo-ligase family protein (NCBI ptt file), at 786,827 to 787,501
SO0774
Position (kb) 786
787 Strain fitness (log2 ratio) -1
0
1
2 at 785.077 kb on + strand at 785.085 kb on - strand at 785.167 kb on + strand, within SO0772 at 785.206 kb on + strand, within SO0772 at 785.220 kb on - strand, within SO0772 at 785.336 kb on + strand, within SO0772 at 785.369 kb on - strand, within SO0772 at 785.527 kb on - strand, within SO0772 at 785.547 kb on - strand, within SO0772 at 785.567 kb on - strand, within SO0772 at 785.572 kb on - strand, within SO0772 at 785.572 kb on - strand, within SO0772 at 785.572 kb on - strand, within SO0772 at 785.632 kb on + strand, within SO0772 at 785.644 kb on - strand, within SO0772 at 786.872 kb on - strand at 786.904 kb on - strand, within SO0774 at 786.904 kb on - strand, within SO0774 at 786.928 kb on - strand, within SO0774 at 786.929 kb on - strand, within SO0774 at 786.945 kb on + strand, within SO0774 at 786.953 kb on - strand, within SO0774 at 786.989 kb on + strand, within SO0774 at 786.997 kb on - strand, within SO0774 at 787.053 kb on - strand, within SO0774 at 787.063 kb on + strand, within SO0774 at 787.086 kb on - strand, within SO0774 at 787.086 kb on - strand, within SO0774 at 787.169 kb on - strand, within SO0774 at 787.178 kb on - strand, within SO0774 at 787.190 kb on + strand, within SO0774 at 787.213 kb on + strand, within SO0774 at 787.318 kb on + strand, within SO0774 at 787.318 kb on + strand, within SO0774 at 787.326 kb on - strand, within SO0774 at 787.376 kb on - strand, within SO0774 at 787.469 kb on - strand at 787.541 kb on - strand at 787.577 kb on + strand at 787.605 kb on - strand at 787.665 kb on - strand at 787.750 kb on - strand at 787.750 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction minimal media, aerobic, 0G configuration remove 785,077 + -0.0 785,085 - -0.3 785,167 + SO0772 0.12 -0.9 785,206 + SO0772 0.17 -1.0 785,220 - SO0772 0.19 -0.2 785,336 + SO0772 0.35 +0.9 785,369 - SO0772 0.40 +1.7 785,527 - SO0772 0.62 -0.3 785,547 - SO0772 0.65 +0.9 785,567 - SO0772 0.68 -1.6 785,572 - SO0772 0.68 +0.0 785,572 - SO0772 0.68 +0.5 785,572 - SO0772 0.68 -0.8 785,632 + SO0772 0.77 -0.3 785,644 - SO0772 0.78 -0.4 786,872 - -0.3 786,904 - SO0774 0.11 +0.2 786,904 - SO0774 0.11 +0.0 786,928 - SO0774 0.15 -0.9 786,929 - SO0774 0.15 -0.6 786,945 + SO0774 0.17 +0.6 786,953 - SO0774 0.19 +0.3 786,989 + SO0774 0.24 -0.0 786,997 - SO0774 0.25 -0.9 787,053 - SO0774 0.33 -0.6 787,063 + SO0774 0.35 -1.0 787,086 - SO0774 0.38 +0.1 787,086 - SO0774 0.38 -0.2 787,169 - SO0774 0.51 +2.7 787,178 - SO0774 0.52 -0.4 787,190 + SO0774 0.54 +0.5 787,213 + SO0774 0.57 -1.3 787,318 + SO0774 0.73 +0.0 787,318 + SO0774 0.73 -0.9 787,326 - SO0774 0.74 -0.4 787,376 - SO0774 0.81 -0.8 787,469 - +1.0 787,541 - -0.5 787,577 + +0.6 787,605 - +0.6 787,665 - +0.1 787,750 - -0.3 787,750 - +0.3
Or see this region's nucleotide sequence