Experiment: minimal media, aerobic, 0G configuration
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0731 and SO0732 are separated by 237 nucleotides SO0732 and SO0733 are separated by 312 nucleotides
SO0731: SO0731 - ISSod3, transposase (NCBI ptt file), at 746,230 to 747,444
SO0731
SO0732: SO0732 - conserved hypothetical protein (NCBI ptt file), at 747,682 to 747,924
SO0732
SO0733: SO0733 - cold shock domain family protein (NCBI ptt file), at 748,237 to 748,848
SO0733
Position (kb) 747
748 Strain fitness (log2 ratio) -2
-1
0
1
2 at 747.568 kb on + strand at 747.578 kb on + strand at 747.580 kb on + strand at 747.624 kb on + strand at 747.624 kb on + strand at 747.632 kb on - strand at 747.632 kb on - strand at 747.640 kb on - strand at 747.802 kb on + strand, within SO0732 at 747.914 kb on + strand at 747.949 kb on + strand at 747.969 kb on + strand at 747.999 kb on + strand at 747.999 kb on + strand at 748.027 kb on - strand at 748.027 kb on - strand at 748.164 kb on + strand at 748.167 kb on - strand at 748.167 kb on - strand at 748.245 kb on + strand at 748.374 kb on - strand, within SO0733 at 748.405 kb on + strand, within SO0733 at 748.408 kb on + strand, within SO0733 at 748.491 kb on - strand, within SO0733 at 748.545 kb on - strand, within SO0733 at 748.579 kb on + strand, within SO0733 at 748.634 kb on - strand, within SO0733 at 748.638 kb on + strand, within SO0733 at 748.646 kb on - strand, within SO0733 at 748.822 kb on + strand at 748.832 kb on + strand at 748.832 kb on + strand at 748.924 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction minimal media, aerobic, 0G configuration remove 747,568 + +1.8 747,578 + -0.3 747,580 + -1.8 747,624 + +0.1 747,624 + +2.6 747,632 - +0.4 747,632 - +0.4 747,640 - +1.2 747,802 + SO0732 0.49 +0.7 747,914 + -0.2 747,949 + +0.1 747,969 + +0.8 747,999 + +0.2 747,999 + -0.6 748,027 - +0.7 748,027 - +1.3 748,164 + +0.4 748,167 - +0.2 748,167 - +0.0 748,245 + +0.8 748,374 - SO0733 0.22 -0.1 748,405 + SO0733 0.27 +0.6 748,408 + SO0733 0.28 +0.4 748,491 - SO0733 0.42 +0.9 748,545 - SO0733 0.50 +0.1 748,579 + SO0733 0.56 +0.3 748,634 - SO0733 0.65 +1.4 748,638 + SO0733 0.66 +0.6 748,646 - SO0733 0.67 +0.2 748,822 + +0.0 748,832 + +1.0 748,832 + -0.1 748,924 + +0.4
Or see this region's nucleotide sequence