Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS24865

Experiment: Azelaic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRR42_RS24865 and RR42_RS24870 are separated by 849 nucleotides RR42_RS24865: RR42_RS24865 - hypothetical protein, at 916,845 to 917,063 _RS24865 RR42_RS24870: RR42_RS24870 - membrane protein, at 917,913 to 919,076 _RS24870 Position (kb) 916 917 918Strain fitness (log2 ratio) -2 -1 0 1at 916.143 kb on - strandat 916.212 kb on + strandat 916.212 kb on + strandat 916.212 kb on + strandat 916.212 kb on + strandat 916.213 kb on - strandat 916.213 kb on - strandat 916.213 kb on - strandat 916.620 kb on - strandat 917.288 kb on - strandat 917.318 kb on + strandat 917.335 kb on - strandat 917.335 kb on - strandat 917.405 kb on + strandat 917.496 kb on - strandat 917.529 kb on + strandat 917.529 kb on + strandat 917.530 kb on - strandat 917.694 kb on - strandat 917.754 kb on + strandat 917.754 kb on + strandat 917.755 kb on - strandat 917.826 kb on + strandat 917.847 kb on + strandat 917.992 kb on - strandat 918.019 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Azelaic (C)
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916,143 - -1.1
916,212 + +0.5
916,212 + -1.1
916,212 + +0.2
916,212 + -0.5
916,213 - +0.1
916,213 - +0.5
916,213 - -0.1
916,620 - -0.3
917,288 - -0.1
917,318 + -2.3
917,335 - -0.4
917,335 - -0.1
917,405 + -1.1
917,496 - -1.1
917,529 + -0.0
917,529 + +0.2
917,530 - -1.4
917,694 - +0.0
917,754 + -0.5
917,754 + -0.7
917,755 - -1.3
917,826 + +0.2
917,847 + -0.3
917,992 - -1.5
918,019 - +0.5

Or see this region's nucleotide sequence