Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16990

Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS16985 and BWI76_RS16990 overlap by 26 nucleotidesBWI76_RS16990 and BWI76_RS16995 are separated by 16 nucleotides BWI76_RS16985: BWI76_RS16985 - signal peptide peptidase SppA, at 3,522,317 to 3,523,591 _RS16985 BWI76_RS16990: BWI76_RS16990 - ABC transporter ATP-binding protein, at 3,523,566 to 3,524,312 _RS16990 BWI76_RS16995: BWI76_RS16995 - Fe-S cluster assembly protein SufB, at 3,524,329 to 3,525,816 _RS16995 Position (kb) 3523 3524 3525Strain fitness (log2 ratio) -3 -2 -1 0 1at 3522.647 kb on + strand, within BWI76_RS16985at 3523.572 kb on - strandat 3523.977 kb on - strand, within BWI76_RS16990at 3524.182 kb on - strand, within BWI76_RS16990at 3524.257 kb on - strandat 3524.529 kb on - strand, within BWI76_RS16995at 3524.607 kb on + strand, within BWI76_RS16995at 3524.757 kb on + strand, within BWI76_RS16995at 3524.899 kb on - strand, within BWI76_RS16995at 3525.230 kb on + strand, within BWI76_RS16995

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x
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3,522,647 + BWI76_RS16985 0.26 +0.8
3,523,572 - -1.6
3,523,977 - BWI76_RS16990 0.55 -1.4
3,524,182 - BWI76_RS16990 0.82 -1.3
3,524,257 - -0.8
3,524,529 - BWI76_RS16995 0.13 -1.4
3,524,607 + BWI76_RS16995 0.19 -3.2
3,524,757 + BWI76_RS16995 0.29 -0.7
3,524,899 - BWI76_RS16995 0.38 -1.1
3,525,230 + BWI76_RS16995 0.61 -1.2

Or see this region's nucleotide sequence