Experiment: Varel_Bryant_medium_Glucose with Phenazine ethosulfate 0.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0470 and BT0471 are separated by 6 nucleotides BT0471 and BT0472 are separated by 7 nucleotides BT0472 and BT0473 are separated by 9 nucleotides
BT0470: BT0470 - hypothetical protein (NCBI ptt file), at 581,522 to 582,751
BT0470
BT0471: BT0471 - glycosyltransferase (NCBI ptt file), at 582,758 to 583,972
BT0471
BT0472: BT0472 - putative acyltransferase in colanic acid biosynthesis (NCBI ptt file), at 583,980 to 584,738
BT0472
BT0473: BT0473 - putative glycosyltransferase (NCBI ptt file), at 584,748 to 585,689
BT0473
Position (kb) 582
583
584 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 581.797 kb on - strand, within BT0470 at 581.966 kb on - strand, within BT0470 at 582.071 kb on - strand, within BT0470 at 582.086 kb on - strand, within BT0470 at 582.100 kb on - strand, within BT0470 at 582.115 kb on - strand, within BT0470 at 582.115 kb on - strand, within BT0470 at 582.125 kb on - strand, within BT0470 at 582.125 kb on - strand, within BT0470 at 582.152 kb on - strand, within BT0470 at 582.257 kb on - strand, within BT0470 at 582.260 kb on - strand, within BT0470 at 582.260 kb on - strand, within BT0470 at 582.303 kb on - strand, within BT0470 at 582.307 kb on - strand, within BT0470 at 582.307 kb on - strand, within BT0470 at 582.391 kb on - strand, within BT0470 at 582.409 kb on - strand, within BT0470 at 582.426 kb on - strand, within BT0470 at 582.449 kb on - strand, within BT0470 at 582.498 kb on - strand, within BT0470 at 582.509 kb on - strand, within BT0470 at 582.667 kb on - strand at 582.667 kb on - strand at 582.835 kb on - strand at 583.013 kb on - strand, within BT0471 at 583.058 kb on - strand, within BT0471 at 583.147 kb on - strand, within BT0471 at 583.257 kb on + strand, within BT0471 at 583.303 kb on - strand, within BT0471 at 583.420 kb on - strand, within BT0471 at 583.424 kb on + strand, within BT0471 at 583.425 kb on - strand, within BT0471 at 583.425 kb on - strand, within BT0471 at 583.427 kb on - strand, within BT0471 at 583.669 kb on + strand, within BT0471 at 583.751 kb on - strand, within BT0471 at 583.764 kb on + strand, within BT0471 at 583.765 kb on - strand, within BT0471 at 583.950 kb on - strand at 584.004 kb on - strand at 584.284 kb on - strand, within BT0472 at 584.321 kb on - strand, within BT0472 at 584.323 kb on - strand, within BT0472 at 584.422 kb on - strand, within BT0472 at 584.451 kb on - strand, within BT0472 at 584.451 kb on - strand, within BT0472 at 584.564 kb on - strand, within BT0472 at 584.651 kb on - strand, within BT0472 at 584.722 kb on - strand at 584.868 kb on - strand, within BT0473 at 584.880 kb on - strand, within BT0473
Per-strain Table
Position Strand Gene LocusTag Fraction Varel_Bryant_medium_Glucose with Phenazine ethosulfate 0.1 mM remove 581,797 - BT0470 0.22 -4.6 581,966 - BT0470 0.36 +2.0 582,071 - BT0470 0.45 -2.3 582,086 - BT0470 0.46 -0.5 582,100 - BT0470 0.47 -0.3 582,115 - BT0470 0.48 +1.4 582,115 - BT0470 0.48 -1.0 582,125 - BT0470 0.49 +1.4 582,125 - BT0470 0.49 -1.0 582,152 - BT0470 0.51 -0.0 582,257 - BT0470 0.60 +1.4 582,260 - BT0470 0.60 +1.0 582,260 - BT0470 0.60 -3.2 582,303 - BT0470 0.63 -1.0 582,307 - BT0470 0.64 -2.6 582,307 - BT0470 0.64 -0.3 582,391 - BT0470 0.71 +1.4 582,409 - BT0470 0.72 -4.1 582,426 - BT0470 0.73 -1.8 582,449 - BT0470 0.75 -1.0 582,498 - BT0470 0.79 -0.0 582,509 - BT0470 0.80 +1.3 582,667 - -2.6 582,667 - -0.0 582,835 - +1.0 583,013 - BT0471 0.21 -0.0 583,058 - BT0471 0.25 -0.0 583,147 - BT0471 0.32 -1.0 583,257 + BT0471 0.41 -2.3 583,303 - BT0471 0.45 -0.6 583,420 - BT0471 0.54 -1.9 583,424 + BT0471 0.55 -0.0 583,425 - BT0471 0.55 -2.1 583,425 - BT0471 0.55 -1.0 583,427 - BT0471 0.55 -0.0 583,669 + BT0471 0.75 -3.1 583,751 - BT0471 0.82 -2.6 583,764 + BT0471 0.83 -1.0 583,765 - BT0471 0.83 -1.3 583,950 - -1.0 584,004 - +0.6 584,284 - BT0472 0.40 +0.9 584,321 - BT0472 0.45 -2.0 584,323 - BT0472 0.45 -2.0 584,422 - BT0472 0.58 +1.0 584,451 - BT0472 0.62 -0.0 584,451 - BT0472 0.62 +0.4 584,564 - BT0472 0.77 -1.0 584,651 - BT0472 0.88 +1.8 584,722 - -0.0 584,868 - BT0473 0.13 +0.2 584,880 - BT0473 0.14 -1.0
Or see this region's nucleotide sequence