Experiment: MoYLS4 with Uranyl Acetate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1857 and DVU1858 are separated by 254 nucleotides DVU1858 and DVU1859 are separated by 355 nucleotides DVU1859 and cutE overlap by 16 nucleotides
DVU1857: DVU1857 - methyl-accepting chemotaxis protein (TIGR), at 1,923,475 to 1,925,562
DVU1857
DVU1858: DVU1858 - cold shock domain protein (TIGR), at 1,925,817 to 1,926,353
DVU1858
DVU1859: DVU1859 - hypothetical protein (TIGR), at 1,926,709 to 1,926,834
DVU1859
DVU1860: cutE - apolipoprotein N-acyltransferase (TIGR), at 1,926,819 to 1,928,327
cutE
Position (kb)
1925
1926
1927 Strain fitness (log2 ratio)
-1
0
1
2 at 1924.925 kb on - strand, within DVU1857 at 1924.935 kb on - strand, within DVU1857 at 1924.955 kb on + strand, within DVU1857 at 1924.968 kb on - strand, within DVU1857 at 1924.968 kb on - strand, within DVU1857 at 1924.968 kb on - strand, within DVU1857 at 1924.973 kb on - strand, within DVU1857 at 1925.037 kb on - strand, within DVU1857 at 1925.039 kb on - strand, within DVU1857 at 1925.041 kb on + strand, within DVU1857 at 1925.064 kb on + strand, within DVU1857 at 1925.201 kb on - strand, within DVU1857 at 1925.324 kb on + strand, within DVU1857 at 1925.332 kb on - strand, within DVU1857 at 1925.595 kb on + strand at 1925.702 kb on + strand at 1925.771 kb on - strand at 1925.879 kb on + strand, within DVU1858 at 1926.027 kb on - strand, within DVU1858 at 1926.058 kb on + strand, within DVU1858 at 1926.133 kb on + strand, within DVU1858 at 1926.136 kb on - strand, within DVU1858 at 1926.137 kb on + strand, within DVU1858 at 1926.143 kb on - strand, within DVU1858 at 1926.192 kb on - strand, within DVU1858 at 1926.319 kb on + strand at 1926.321 kb on + strand at 1926.337 kb on - strand at 1926.418 kb on + strand at 1926.505 kb on + strand at 1926.682 kb on + strand at 1926.694 kb on - strand at 1926.724 kb on - strand, within DVU1859 at 1926.730 kb on - strand, within DVU1859 at 1926.737 kb on - strand, within DVU1859 at 1926.827 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Uranyl Acetate 1mM remove 1,924,925 - DVU1857 0.69 +0.9 1,924,935 - DVU1857 0.70 -0.5 1,924,955 + DVU1857 0.71 -0.2 1,924,968 - DVU1857 0.72 +0.5 1,924,968 - DVU1857 0.72 +0.3 1,924,968 - DVU1857 0.72 +0.1 1,924,973 - DVU1857 0.72 -0.3 1,925,037 - DVU1857 0.75 +0.3 1,925,039 - DVU1857 0.75 +0.1 1,925,041 + DVU1857 0.75 -0.5 1,925,064 + DVU1857 0.76 +0.3 1,925,201 - DVU1857 0.83 -1.3 1,925,324 + DVU1857 0.89 -0.2 1,925,332 - DVU1857 0.89 -0.1 1,925,595 + -0.3 1,925,702 + -0.2 1,925,771 - +0.0 1,925,879 + DVU1858 0.12 +0.6 1,926,027 - DVU1858 0.39 +1.2 1,926,058 + DVU1858 0.45 +0.3 1,926,133 + DVU1858 0.59 -0.1 1,926,136 - DVU1858 0.59 +0.1 1,926,137 + DVU1858 0.60 +0.3 1,926,143 - DVU1858 0.61 +1.8 1,926,192 - DVU1858 0.70 -0.4 1,926,319 + +1.0 1,926,321 + +1.1 1,926,337 - -0.2 1,926,418 + -0.4 1,926,505 + +0.2 1,926,682 + -1.5 1,926,694 - -0.6 1,926,724 - DVU1859 0.12 +1.2 1,926,730 - DVU1859 0.17 -0.1 1,926,737 - DVU1859 0.22 +1.0 1,926,827 - +0.1
Or see this region's nucleotide sequence