Experiment: MoYLS4 with Uranyl Acetate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt recJ and lipA are separated by 98 nucleotides lipA and lipB overlap by 71 nucleotides lipB and DVU0907 overlap by 14 nucleotides
DVU0904: recJ - single-stranded-DNA-specific exonuclease RecJ (TIGR), at 995,665 to 997,380
recJ
DVU0905: lipA - lipoic acid synthetase (TIGR), at 997,479 to 998,375
lipA
DVU0906: lipB - lipoate-protein ligase B (TIGR), at 998,305 to 998,961
lipB
DVU0907: DVU0907 - conserved domain protein (TIGR), at 998,948 to 1,001,887
DVU0907
Position (kb) 997
998
999 Strain fitness (log2 ratio) -2
-1
0
1 at 996.513 kb on + strand, within recJ at 996.658 kb on - strand, within recJ at 996.712 kb on + strand, within recJ at 996.797 kb on + strand, within recJ at 996.807 kb on - strand, within recJ at 996.898 kb on - strand, within recJ at 996.984 kb on - strand, within recJ at 997.200 kb on - strand, within recJ at 997.385 kb on + strand at 997.539 kb on + strand at 997.545 kb on + strand at 997.668 kb on - strand, within lipA at 997.795 kb on + strand, within lipA at 997.803 kb on - strand, within lipA at 997.813 kb on - strand, within lipA at 997.813 kb on - strand, within lipA at 997.879 kb on - strand, within lipA at 997.907 kb on - strand, within lipA at 997.968 kb on + strand, within lipA at 997.976 kb on - strand, within lipA at 997.986 kb on - strand, within lipA at 997.986 kb on - strand, within lipA at 998.021 kb on - strand, within lipA at 998.069 kb on + strand, within lipA at 998.252 kb on - strand, within lipA at 998.264 kb on - strand, within lipA at 998.277 kb on - strand, within lipA at 998.277 kb on - strand, within lipA at 998.277 kb on - strand, within lipA at 998.383 kb on - strand, within lipB at 998.554 kb on - strand, within lipB at 998.587 kb on + strand, within lipB at 998.601 kb on + strand, within lipB at 998.859 kb on + strand, within lipB at 998.923 kb on - strand at 998.927 kb on + strand at 999.021 kb on + strand at 999.039 kb on + strand at 999.051 kb on + strand at 999.116 kb on + strand at 999.124 kb on - strand at 999.182 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Uranyl Acetate 1mM remove 996,513 + recJ DVU0904 0.49 -0.0 996,658 - recJ DVU0904 0.58 -0.4 996,712 + recJ DVU0904 0.61 -0.3 996,797 + recJ DVU0904 0.66 +0.7 996,807 - recJ DVU0904 0.67 +0.8 996,898 - recJ DVU0904 0.72 +0.6 996,984 - recJ DVU0904 0.77 -1.0 997,200 - recJ DVU0904 0.89 +0.2 997,385 + -0.1 997,539 + -0.7 997,545 + +0.2 997,668 - lipA DVU0905 0.21 -0.1 997,795 + lipA DVU0905 0.35 -2.5 997,803 - lipA DVU0905 0.36 -0.6 997,813 - lipA DVU0905 0.37 -0.7 997,813 - lipA DVU0905 0.37 -0.8 997,879 - lipA DVU0905 0.45 -1.0 997,907 - lipA DVU0905 0.48 -0.7 997,968 + lipA DVU0905 0.55 -0.4 997,976 - lipA DVU0905 0.55 -0.7 997,986 - lipA DVU0905 0.57 -1.4 997,986 - lipA DVU0905 0.57 -1.4 998,021 - lipA DVU0905 0.60 -0.4 998,069 + lipA DVU0905 0.66 -0.3 998,252 - lipA DVU0905 0.86 -0.5 998,264 - lipA DVU0905 0.88 -0.3 998,277 - lipA DVU0905 0.89 -1.2 998,277 - lipA DVU0905 0.89 -0.2 998,277 - lipA DVU0905 0.89 +0.6 998,383 - lipB DVU0906 0.12 -2.4 998,554 - lipB DVU0906 0.38 -0.2 998,587 + lipB DVU0906 0.43 -0.6 998,601 + lipB DVU0906 0.45 -1.0 998,859 + lipB DVU0906 0.84 -0.4 998,923 - -0.1 998,927 + -0.5 999,021 + -0.2 999,039 + +0.2 999,051 + -0.5 999,116 + +0.2 999,124 - -0.5 999,182 - -0.2
Or see this region's nucleotide sequence