Experiment: MoYLS4 with Uranyl Acetate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2003 and DVU2004 are separated by 117 nucleotides DVU2004 and DVU2006 are separated by 305 nucleotides DVU2006 and DVU2007 are separated by 110 nucleotides
DVU2003: DVU2003 - transposase, IS5 family, truncation (TIGR), at 2,084,977 to 2,086,239
DVU2003
DVU2004: DVU2004 - ISDvu4, transposase (TIGR), at 2,086,357 to 2,087,406
DVU2004
DVU2006: DVU2006 - hypothetical protein (TIGR), at 2,087,712 to 2,087,867
DVU2006
DVU2007: DVU2007 - nuclease, putative (TIGR), at 2,087,978 to 2,088,394
DVU2007
Position (kb)
2086
2087
2088 Strain fitness (log2 ratio)
-1
0
1 at 2085.498 kb on + strand, within DVU2003 at 2085.625 kb on + strand, within DVU2003 at 2085.640 kb on - strand, within DVU2003 at 2085.740 kb on + strand, within DVU2003 at 2085.756 kb on + strand, within DVU2003 at 2085.764 kb on - strand, within DVU2003 at 2085.766 kb on + strand, within DVU2003 at 2085.787 kb on + strand, within DVU2003 at 2085.790 kb on - strand, within DVU2003 at 2085.897 kb on - strand, within DVU2003 at 2085.922 kb on + strand, within DVU2003 at 2085.984 kb on - strand, within DVU2003 at 2085.989 kb on - strand, within DVU2003 at 2086.014 kb on + strand, within DVU2003 at 2086.030 kb on + strand, within DVU2003 at 2086.074 kb on + strand, within DVU2003 at 2087.449 kb on + strand at 2087.484 kb on + strand at 2087.540 kb on - strand at 2088.004 kb on - strand at 2088.072 kb on - strand, within DVU2007 at 2088.076 kb on + strand, within DVU2007 at 2088.098 kb on - strand, within DVU2007 at 2088.202 kb on + strand, within DVU2007
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Uranyl Acetate 1mM remove 2,085,498 + DVU2003 0.41 +0.3 2,085,625 + DVU2003 0.51 -0.1 2,085,640 - DVU2003 0.52 +0.3 2,085,740 + DVU2003 0.60 -0.1 2,085,756 + DVU2003 0.62 -0.3 2,085,764 - DVU2003 0.62 -0.3 2,085,766 + DVU2003 0.62 +0.2 2,085,787 + DVU2003 0.64 +0.5 2,085,790 - DVU2003 0.64 +1.1 2,085,897 - DVU2003 0.73 +1.2 2,085,922 + DVU2003 0.75 -0.5 2,085,984 - DVU2003 0.80 +0.5 2,085,989 - DVU2003 0.80 +1.0 2,086,014 + DVU2003 0.82 +0.7 2,086,030 + DVU2003 0.83 -0.1 2,086,074 + DVU2003 0.87 -0.0 2,087,449 + -1.6 2,087,484 + -0.1 2,087,540 - -0.1 2,088,004 - +0.1 2,088,072 - DVU2007 0.23 +0.7 2,088,076 + DVU2007 0.24 +1.7 2,088,098 - DVU2007 0.29 -0.2 2,088,202 + DVU2007 0.54 -0.0
Or see this region's nucleotide sequence